CNRS Nantes University US2B US2B
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***  ELECTRON TRANSPORT 31-MAR-94 1FDN  ***

CA strain for 24050717233232136

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1TYR 2 0.0159
TYR 2VAL 3 0.0888
VAL 3ILE 4 -0.0377
ILE 4ASN 5 0.0666
ASN 5GLU 6 0.0648
GLU 6ALA 7 -0.1249
ALA 7CYS 8 0.0155
CYS 8ILE 9 0.0445
ILE 9SER 10 0.0268
SER 10CYS 11 -0.0778
CYS 11GLY 12 -0.0136
GLY 12ALA 13 0.0347
ALA 13CYS 14 -0.0146
CYS 14GLU 15 0.0184
GLU 15PRO 16 0.0359
PRO 16GLU 17 0.0372
GLU 17CYS 18 -0.0667
CYS 18PRO 19 -0.0042
PRO 19VAL 20 -0.0973
VAL 20ASN 21 0.0804
ASN 21ALA 22 0.0033
ALA 22ILE 23 -0.0056
ILE 23SER 24 0.0554
SER 24SER 25 0.0733
SER 25GLY 26 0.1243
GLY 26ASP 27 0.1902
ASP 27ASP 28 -0.0615
ASP 28ARG 29 0.0383
ARG 29TYR 30 -0.0144
TYR 30VAL 31 0.1007
VAL 31ILE 32 0.0796
ILE 32ASP 33 0.1558
ASP 33ALA 34 -0.0823
ALA 34ASP 35 0.1925
ASP 35THR 36 -0.2594
THR 36CYS 37 -0.0259
CYS 37ILE 38 0.0511
ILE 38ASP 39 0.0007
ASP 39CYS 40 0.0408
CYS 40GLY 41 -0.0610
GLY 41ALA 42 0.1394
ALA 42CYS 43 -0.0187
CYS 43ALA 44 -0.0256
ALA 44GLY 45 0.0614
GLY 45VAL 46 0.0176
VAL 46CYS 47 -0.0691
CYS 47PRO 48 -0.0322
PRO 48VAL 49 -0.0368
VAL 49ASP 50 0.0158
ASP 50ALA 51 0.0048
ALA 51PRO 52 -0.0269
PRO 52VAL 53 0.0328
VAL 53GLN 54 -0.0232
GLN 54ALA 55 0.0443

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.