CNRS Nantes University US2B US2B
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***  ELECTRON TRANSPORT 31-MAR-94 1FDN  ***

CA strain for 24050717233232136

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1TYR 2 0.0088
TYR 2VAL 3 -0.0134
VAL 3ILE 4 -0.0086
ILE 4ASN 5 0.0193
ASN 5GLU 6 0.0145
GLU 6ALA 7 -0.0131
ALA 7CYS 8 0.0009
CYS 8ILE 9 -0.0143
ILE 9SER 10 0.0096
SER 10CYS 11 0.0519
CYS 11GLY 12 -0.0162
GLY 12ALA 13 0.0283
ALA 13CYS 14 -0.0108
CYS 14GLU 15 0.0025
GLU 15PRO 16 0.0094
PRO 16GLU 17 0.0016
GLU 17CYS 18 -0.0074
CYS 18PRO 19 0.0031
PRO 19VAL 20 0.0020
VAL 20ASN 21 0.0031
ASN 21ALA 22 0.0014
ALA 22ILE 23 -0.0046
ILE 23SER 24 0.0026
SER 24SER 25 0.0176
SER 25GLY 26 -0.0215
GLY 26ASP 27 -0.0103
ASP 27ASP 28 0.2442
ASP 28ARG 29 0.0596
ARG 29TYR 30 0.0114
TYR 30VAL 31 -0.0108
VAL 31ILE 32 -0.0909
ILE 32ASP 33 0.0081
ASP 33ALA 34 -0.0080
ALA 34ASP 35 0.0090
ASP 35THR 36 0.0160
THR 36CYS 37 0.0127
CYS 37ILE 38 -0.0202
ILE 38ASP 39 0.0031
ASP 39CYS 40 0.0031
CYS 40GLY 41 0.0044
GLY 41ALA 42 0.0096
ALA 42CYS 43 -0.0068
CYS 43ALA 44 0.0004
ALA 44GLY 45 -0.0039
GLY 45VAL 46 0.0129
VAL 46CYS 47 -0.0132
CYS 47PRO 48 0.0001
PRO 48VAL 49 -0.0125
VAL 49ASP 50 0.0163
ASP 50ALA 51 -0.0064
ALA 51PRO 52 0.0096
PRO 52VAL 53 -0.0007
VAL 53GLN 54 0.0110
GLN 54ALA 55 0.0052

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.