CNRS Nantes University US2B US2B
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***  ELECTRON TRANSPORT 31-MAR-94 1FDN  ***

CA strain for 24050717212730573

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1TYR 2 0.0371
TYR 2VAL 3 0.2200
VAL 3ILE 4 -0.0888
ILE 4ASN 5 0.1530
ASN 5GLU 6 0.1317
GLU 6ALA 7 -0.2779
ALA 7CYS 8 0.0370
CYS 8ILE 9 0.1106
ILE 9SER 10 0.0629
SER 10CYS 11 -0.1895
CYS 11GLY 12 -0.0314
GLY 12ALA 13 0.0852
ALA 13CYS 14 -0.0367
CYS 14GLU 15 0.0456
GLU 15PRO 16 0.0894
PRO 16GLU 17 0.0898
GLU 17CYS 18 -0.1616
CYS 18PRO 19 -0.0089
PRO 19VAL 20 -0.2239
VAL 20ASN 21 0.1779
ASN 21ALA 22 0.0078
ALA 22ILE 23 -0.0113
ILE 23SER 24 0.1309
SER 24SER 25 0.1765
SER 25GLY 26 0.2636
GLY 26ASP 27 0.3102
ASP 27ASP 28 -0.1029
ASP 28ARG 29 0.0611
ARG 29TYR 30 -0.0306
TYR 30VAL 31 0.2505
VAL 31ILE 32 0.1867
ILE 32ASP 33 0.3191
ASP 33ALA 34 -0.1980
ALA 34ASP 35 0.2861
ASP 35THR 36 -0.4103
THR 36CYS 37 -0.0519
CYS 37ILE 38 0.1225
ILE 38ASP 39 0.0014
ASP 39CYS 40 0.0980
CYS 40GLY 41 -0.1428
GLY 41ALA 42 0.3296
ALA 42CYS 43 -0.0456
CYS 43ALA 44 -0.0637
ALA 44GLY 45 0.1534
GLY 45VAL 46 0.0431
VAL 46CYS 47 -0.1720
CYS 47PRO 48 -0.0764
PRO 48VAL 49 -0.0885
VAL 49ASP 50 0.0357
ASP 50ALA 51 0.0124
ALA 51PRO 52 -0.0638
PRO 52VAL 53 0.0795
VAL 53GLN 54 -0.0537
GLN 54ALA 55 0.0940

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.