CNRS Nantes University US2B US2B
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***  ELECTRON TRANSPORT 31-MAR-94 1FDN  ***

CA strain for 24050717155327388

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1TYR 2 0.0630
TYR 2VAL 3 0.4263
VAL 3ILE 4 -0.1530
ILE 4ASN 5 0.2365
ASN 5GLU 6 0.1560
GLU 6ALA 7 -0.3952
ALA 7CYS 8 0.0644
CYS 8ILE 9 0.2146
ILE 9SER 10 0.0999
SER 10CYS 11 -0.3386
CYS 11GLY 12 -0.0490
GLY 12ALA 13 0.1614
ALA 13CYS 14 -0.0718
CYS 14GLU 15 0.0909
GLU 15PRO 16 0.1740
PRO 16GLU 17 0.1646
GLU 17CYS 18 -0.2886
CYS 18PRO 19 -0.0126
PRO 19VAL 20 -0.3480
VAL 20ASN 21 0.2524
ASN 21ALA 22 0.0146
ALA 22ILE 23 -0.0156
ILE 23SER 24 0.2225
SER 24SER 25 0.3100
SER 25GLY 26 0.3359
GLY 26ASP 27 0.2718
ASP 27ASP 28 -0.0945
ASP 28ARG 29 0.0533
ARG 29TYR 30 -0.0418
TYR 30VAL 31 0.4983
VAL 31ILE 32 0.2994
ILE 32ASP 33 0.3791
ASP 33ALA 34 -0.3474
ALA 34ASP 35 0.2298
ASP 35THR 36 -0.3423
THR 36CYS 37 -0.0625
CYS 37ILE 38 0.2120
ILE 38ASP 39 0.0016
ASP 39CYS 40 0.1725
CYS 40GLY 41 -0.2303
GLY 41ALA 42 0.5400
ALA 42CYS 43 -0.0828
CYS 43ALA 44 -0.1263
ALA 44GLY 45 0.3016
GLY 45VAL 46 0.0851
VAL 46CYS 47 -0.3382
CYS 47PRO 48 -0.1281
PRO 48VAL 49 -0.1634
VAL 49ASP 50 0.0588
ASP 50ALA 51 0.0236
ALA 51PRO 52 -0.1066
PRO 52VAL 53 0.1415
VAL 53GLN 54 -0.0821
GLN 54ALA 55 0.1213

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.