This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.1244
VAL 2
PHE 3
-0.1186
PHE 3
GLY 4
0.0011
GLY 4
ARG 5
0.0611
ARG 5
CYS 6
-0.2788
CYS 6
GLU 7
-0.0460
GLU 7
LEU 8
-0.0302
LEU 8
ALA 9
-0.0773
ALA 9
ALA 10
0.0183
ALA 10
ALA 11
-0.0471
ALA 11
MET 12
-0.0605
MET 12
LYS 13
0.0507
LYS 13
ARG 14
0.0007
ARG 14
HIS 15
0.1242
HIS 15
GLY 16
-0.2079
GLY 16
LEU 17
-0.0183
LEU 17
ASP 18
0.0608
ASP 18
ASN 19
-0.0224
ASN 19
TYR 20
0.1157
TYR 20
ARG 21
-0.0356
ARG 21
GLY 22
0.0650
GLY 22
TYR 23
0.0228
TYR 23
SER 24
0.0161
SER 24
LEU 25
-0.0189
LEU 25
GLY 26
0.0146
GLY 26
ASN 27
0.0017
ASN 27
TRP 28
-0.0134
TRP 28
VAL 29
-0.0224
VAL 29
CYS 30
-0.0051
CYS 30
ALA 31
-0.0385
ALA 31
ALA 32
0.0599
ALA 32
LYS 33
-0.0369
LYS 33
PHE 34
0.0086
PHE 34
GLU 35
-0.1165
GLU 35
SER 36
0.2753
SER 36
ASN 37
-0.1780
ASN 37
PHE 38
-0.0072
PHE 38
ASN 39
-0.1020
ASN 39
THR 40
0.1947
THR 40
GLN 41
-0.1160
GLN 41
ALA 42
-0.0280
ALA 42
THR 43
-0.3784
THR 43
ASN 44
-0.3381
ASN 44
ARG 45
-0.0933
ARG 45
ASN 46
-0.0586
ASN 46
THR 47
0.0188
THR 47
ASP 48
0.0603
ASP 48
GLY 49
0.0624
GLY 49
SER 50
0.0436
SER 50
THR 51
-0.1339
THR 51
ASP 52
0.0104
ASP 52
TYR 53
0.0036
TYR 53
GLY 54
-0.1200
GLY 54
ILE 55
-0.1250
ILE 55
LEU 56
0.0382
LEU 56
GLN 57
0.0516
GLN 57
ILE 58
-0.2595
ILE 58
ASN 59
0.0108
ASN 59
SER 60
-0.0042
SER 60
ARG 61
-0.1191
ARG 61
TRP 62
0.1856
TRP 62
TRP 63
0.0626
TRP 63
CYS 64
0.0110
CYS 64
ASN 65
-0.0365
ASN 65
ASP 66
-0.0937
ASP 66
GLY 67
0.0545
GLY 67
ARG 68
-0.0504
ARG 68
THR 69
0.0598
THR 69
PRO 70
-0.0037
PRO 70
GLY 71
0.0155
GLY 71
SER 72
0.0690
SER 72
ARG 73
-0.0222
ARG 73
ASN 74
0.1259
ASN 74
LEU 75
-0.0961
LEU 75
CYS 76
0.1587
CYS 76
ASN 77
-0.0287
ASN 77
ILE 78
0.1251
ILE 78
PRO 79
-0.1278
PRO 79
CYS 80
-0.0519
CYS 80
SER 81
0.0241
SER 81
ALA 82
-0.1549
ALA 82
LEU 83
0.0452
LEU 83
LEU 84
0.0544
LEU 84
SER 85
-0.2275
SER 85
SER 86
0.2284
SER 86
ASP 87
-0.0381
ASP 87
ILE 88
-0.0081
ILE 88
THR 89
0.0581
THR 89
ALA 90
0.1205
ALA 90
SER 91
0.0236
SER 91
VAL 92
-0.0247
VAL 92
ASN 93
0.1229
ASN 93
CYS 94
0.2213
CYS 94
ALA 95
-0.0088
ALA 95
LYS 96
0.0225
LYS 96
LYS 97
0.2244
LYS 97
ILE 98
-0.2979
ILE 98
VAL 99
0.1479
VAL 99
SER 100
-0.0134
SER 100
ASP 101
0.1653
ASP 101
GLY 102
0.0560
GLY 102
ASN 103
0.0151
ASN 103
GLY 104
-0.0327
GLY 104
MET 105
-0.0174
MET 105
ASN 106
-0.0079
ASN 106
ALA 107
-0.1368
ALA 107
TRP 108
-0.0369
TRP 108
VAL 109
-0.1418
VAL 109
ALA 110
-0.0058
ALA 110
TRP 111
0.0388
TRP 111
ARG 112
0.0386
ARG 112
ASN 113
-0.0616
ASN 113
ARG 114
-0.0129
ARG 114
CYS 115
0.0081
CYS 115
LYS 116
0.0294
LYS 116
GLY 117
-0.0201
GLY 117
THR 118
0.0001
THR 118
ASP 119
-0.0270
ASP 119
VAL 120
-0.0015
VAL 120
GLN 121
-0.0063
GLN 121
ALA 122
0.0053
ALA 122
TRP 123
-0.0028
TRP 123
ILE 124
-0.0117
ILE 124
ARG 125
0.0236
ARG 125
GLY 126
-0.0011
GLY 126
CYS 127
-0.0253
CYS 127
ARG 128
-0.0613
ARG 128
LEU 129
0.0744
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.