This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0485
VAL 2
PHE 3
-0.0889
PHE 3
GLY 4
-0.1721
GLY 4
ARG 5
-0.1773
ARG 5
CYS 6
0.0004
CYS 6
GLU 7
-0.0983
GLU 7
LEU 8
0.0435
LEU 8
ALA 9
-0.0681
ALA 9
ALA 10
0.0242
ALA 10
ALA 11
0.1385
ALA 11
MET 12
-0.0355
MET 12
LYS 13
-0.0015
LYS 13
ARG 14
0.0052
ARG 14
HIS 15
0.1297
HIS 15
GLY 16
-0.1193
GLY 16
LEU 17
-0.0446
LEU 17
ASP 18
0.1041
ASP 18
ASN 19
-0.0374
ASN 19
TYR 20
0.2553
TYR 20
ARG 21
-0.0585
ARG 21
GLY 22
0.2448
GLY 22
TYR 23
-0.0364
TYR 23
SER 24
0.2178
SER 24
LEU 25
-0.0230
LEU 25
GLY 26
0.0386
GLY 26
ASN 27
0.0823
ASN 27
TRP 28
0.0449
TRP 28
VAL 29
0.0794
VAL 29
CYS 30
0.0442
CYS 30
ALA 31
-0.0327
ALA 31
ALA 32
0.0621
ALA 32
LYS 33
0.0017
LYS 33
PHE 34
0.0720
PHE 34
GLU 35
-0.2612
GLU 35
SER 36
0.2317
SER 36
ASN 37
-0.1206
ASN 37
PHE 38
0.0649
PHE 38
ASN 39
-0.3632
ASN 39
THR 40
-0.0335
THR 40
GLN 41
0.0581
GLN 41
ALA 42
0.1160
ALA 42
THR 43
-0.3920
THR 43
ASN 44
0.1859
ASN 44
ARG 45
-0.2598
ARG 45
ASN 46
-0.0289
ASN 46
THR 47
-0.1363
THR 47
ASP 48
0.0071
ASP 48
GLY 49
-0.0623
GLY 49
SER 50
-0.0119
SER 50
THR 51
-0.1056
THR 51
ASP 52
-0.1688
ASP 52
TYR 53
0.1431
TYR 53
GLY 54
-0.3649
GLY 54
ILE 55
-0.1971
ILE 55
LEU 56
0.1009
LEU 56
GLN 57
-0.1845
GLN 57
ILE 58
-0.1016
ILE 58
ASN 59
0.1700
ASN 59
SER 60
0.0377
SER 60
ARG 61
-0.0624
ARG 61
TRP 62
0.0901
TRP 62
TRP 63
-0.0782
TRP 63
CYS 64
0.3241
CYS 64
ASN 65
0.1713
ASN 65
ASP 66
0.2344
ASP 66
GLY 67
-0.1640
GLY 67
ARG 68
0.1777
ARG 68
THR 69
0.0692
THR 69
PRO 70
-0.1659
PRO 70
GLY 71
0.0765
GLY 71
SER 72
-0.2083
SER 72
ARG 73
0.2880
ARG 73
ASN 74
-0.2630
ASN 74
LEU 75
0.3097
LEU 75
CYS 76
0.0325
CYS 76
ASN 77
0.1227
ASN 77
ILE 78
-0.1342
ILE 78
PRO 79
0.1418
PRO 79
CYS 80
0.1299
CYS 80
SER 81
-0.0107
SER 81
ALA 82
0.1621
ALA 82
LEU 83
-0.0009
LEU 83
LEU 84
-0.0397
LEU 84
SER 85
0.1814
SER 85
SER 86
-0.3345
SER 86
ASP 87
0.0968
ASP 87
ILE 88
0.0302
ILE 88
THR 89
0.0004
THR 89
ALA 90
0.0843
ALA 90
SER 91
-0.0197
SER 91
VAL 92
0.0265
VAL 92
ASN 93
0.0697
ASN 93
CYS 94
0.1090
CYS 94
ALA 95
0.1657
ALA 95
LYS 96
-0.0634
LYS 96
LYS 97
0.3949
LYS 97
ILE 98
-0.0149
ILE 98
VAL 99
0.4331
VAL 99
SER 100
-0.0813
SER 100
ASP 101
0.3236
ASP 101
GLY 102
0.0639
GLY 102
ASN 103
-0.0238
ASN 103
GLY 104
-0.1121
GLY 104
MET 105
0.0813
MET 105
ASN 106
-0.0743
ASN 106
ALA 107
0.2398
ALA 107
TRP 108
0.0674
TRP 108
VAL 109
-0.1000
VAL 109
ALA 110
0.0096
ALA 110
TRP 111
-0.0322
TRP 111
ARG 112
0.0047
ARG 112
ASN 113
0.0113
ASN 113
ARG 114
-0.0407
ARG 114
CYS 115
0.0020
CYS 115
LYS 116
-0.0261
LYS 116
GLY 117
0.0707
GLY 117
THR 118
0.0209
THR 118
ASP 119
-0.0783
ASP 119
VAL 120
0.1270
VAL 120
GLN 121
-0.0654
GLN 121
ALA 122
0.0436
ALA 122
TRP 123
-0.0810
TRP 123
ILE 124
-0.1551
ILE 124
ARG 125
0.1410
ARG 125
GLY 126
0.0044
GLY 126
CYS 127
0.0634
CYS 127
ARG 128
-0.2522
ARG 128
LEU 129
0.2820
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.