CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  gal1_monomer_wt  ***

CA strain for 2405021233474105405

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1001SER 1002 -0.0112
SER 1002GLY 1003 0.1295
GLY 1003LEU 1004 0.3330
LEU 1004VAL 1005 0.0176
VAL 1005ALA 1006 -0.0536
ALA 1006SER 1007 0.0239
SER 1007ASN 1008 -0.0121
ASN 1008LEU 1009 -0.0189
LEU 1009ASN 1010 -0.0011
ASN 1010LEU 1011 -0.0056
LEU 1011LYS 1012 -0.0014
LYS 1012PRO 1013 -0.0044
PRO 1013GLY 1014 0.0038
GLY 1014GLU 1015 0.0067
GLU 1015LEU 1017 0.0087
LEU 1017ARG 1018 0.0008
ARG 1018VAL 1019 0.0055
VAL 1019ARG 1020 -0.0143
ARG 1020GLY 1021 -0.0032
GLY 1021GLU 1022 -0.0148
GLU 1022VAL 1023 -0.0219
VAL 1023ALA 1024 -0.0136
ALA 1024PRO 1025 0.0245
PRO 1025ASP 1026 -0.0111
ASP 1026ALA 1027 0.0074
ALA 1027LYS 1028 -0.0179
LYS 1028SER 1029 -0.0037
SER 1029PHE 1030 -0.0232
PHE 1030VAL 1031 0.0236
VAL 1031LEU 1032 -0.0182
LEU 1032ASN 1033 -0.0111
ASN 1033LEU 1034 -0.0289
LEU 1034GLY 1035 -0.0008
GLY 1035LYS 1036 -0.0046
LYS 1036ASP 1037 -0.0097
ASP 1037SER 1038 0.0054
SER 1038ASN 1039 -0.0327
ASN 1039ASN 1040 0.0066
ASN 1040LEU 1041 -0.0005
LEU 1041CYS 1042 -0.0077
CYS 1042LEU 1043 -0.0028
LEU 1043HIS 1044 -0.0021
HIS 1044PHE 1045 0.0059
PHE 1045ASN 1046 0.0191
ASN 1046PRO 1047 0.0050
PRO 1047ARG 1048 -0.0011
ARG 1048PHE 1049 -0.0030
PHE 1049ASN 1050 -0.0120
ASN 1050ALA 1051 0.0039
ALA 1051HIS 1052 -0.0123
HIS 1052GLY 1053 0.0044
GLY 1053ASP 1054 -0.0026
ASP 1054ALA 1055 0.0071
ALA 1055ASN 1056 -0.0047
ASN 1056THR 1057 0.0116
THR 1057ILE 1058 -0.0018
ILE 1058VAL 1059 0.0060
VAL 1059CYS 1060 0.0139
CYS 1060ASN 1061 0.0166
ASN 1061SER 1062 0.0099
SER 1062LYS 1063 0.0072
LYS 1063ASP 1064 -0.0074
ASP 1064ASP 1065 0.0089
ASP 1065GLY 1066 -0.0011
GLY 1066ALA 1067 0.0018
ALA 1067TRP 1068 0.0005
TRP 1068GLY 1069 -0.0028
GLY 1069THR 1070 0.0066
THR 1070GLU 1071 0.0031
GLU 1071GLN 1072 0.0095
GLN 1072ARG 1073 0.0172
ARG 1073GLU 1074 0.0078
GLU 1074ALA 1075 0.0016
ALA 1075VAL 1076 0.0072
VAL 1076PHE 1077 0.0095
PHE 1077PRO 1078 -0.0056
PRO 1078PHE 1079 0.0200
PHE 1079GLN 1080 -0.0015
GLN 1080PRO 1081 0.0073
PRO 1081GLY 1082 -0.0071
GLY 1082SER 1083 -0.0103
SER 1083VAL 1084 -0.0252
VAL 1084ALA 1085 0.0046
ALA 1085GLU 1086 -0.0212
GLU 1086VAL 1087 -0.0069
VAL 1087CYS 1088 0.0060
CYS 1088ILE 1089 -0.0014
ILE 1089THR 1090 0.0030
THR 1090PHE 1091 -0.0005
PHE 1091ASP 1092 -0.0001
ASP 1092GLN 1093 0.0058
GLN 1093ALA 1094 -0.0006
ALA 1094ASN 1095 0.0053
ASN 1095LEU 1096 -0.0046
LEU 1096THR 1097 0.0008
THR 1097VAL 1098 -0.0001
VAL 1098LYS 1099 0.0024
LYS 1099LEU 1100 -0.0051
LEU 1100PRO 1101 0.0086
PRO 1101ASP 1102 0.0136
ASP 1102GLY 1103 -0.0026
GLY 1103TYR 1104 -0.0006
TYR 1104GLU 1105 0.0042
GLU 1105PHE 1106 0.0051
PHE 1106LYS 1107 0.0122
LYS 1107PHE 1108 -0.0004
PHE 1108PRO 1109 0.0064
PRO 1109ASN 1110 0.0070
ASN 1110ARG 1111 0.0088
ARG 1111LEU 1112 0.0068
LEU 1112ASN 1113 -0.0008
ASN 1113LEU 1114 -0.0092
LEU 1114GLU 1115 0.0035
GLU 1115ALA 1116 -0.0076
ALA 1116ILE 1117 -0.0081
ILE 1117ASN 1118 0.0017
ASN 1118TYR 1119 -0.0206
TYR 1119MET 1120 -0.0064
MET 1120ALA 1121 -0.0802
ALA 1121ALA 1122 0.0219
ALA 1122ASP 1123 0.1439
ASP 1123GLY 1124 -0.1015
GLY 1124ASP 1125 0.0353
ASP 1125PHE 1126 -0.0292
PHE 1126LYS 1127 -0.0047
LYS 1127ILE 1128 -0.0312
ILE 1128LYS 1129 0.0281
LYS 1129CYS 1130 -0.0131
CYS 1130VAL 1131 -0.0292
VAL 1131ALA 1132 0.0517
ALA 1132PHE 1133 -0.0128
PHE 1133ASP 1134 0.0181

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.