CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***    ***

CA strain for 2404282114573491381

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASP 1ALA 2 -0.0699
ALA 2GLU 3 0.0648
GLU 3PHE 4 -0.0527
PHE 4ARG 5 -0.0869
ARG 5HIS 6 0.2954
HIS 6ASP 7 0.0007
ASP 7SER 8 0.0896
SER 8GLY 9 0.0550
GLY 9TYR 10 0.4135
TYR 10GLU 11 -0.1206
GLU 11VAL 12 0.0347
VAL 12HIS 13 0.3024
HIS 13HIS 14 -0.2802
HIS 14GLN 15 0.0434
GLN 15LYS 16 -0.0259
LYS 16LEU 17 -0.0365
LEU 17VAL 18 -0.1143
VAL 18PHE 19 -0.0808
PHE 19PHE 20 0.2100
PHE 20ALA 21 -0.0817
ALA 21GLU 22 -0.0255
GLU 22ASP 23 -0.0160
ASP 23VAL 24 0.0223
VAL 24GLY 25 -0.0847
GLY 25SER 26 -0.2690
SER 26ASN 27 -0.1007
ASN 27LYS 28 0.1977
LYS 28GLY 29 0.1782
GLY 29ALA 30 0.0366
ALA 30ILE 31 -0.3068
ILE 31ILE 32 -0.0562
ILE 32GLY 33 -0.0006
GLY 33LEU 34 0.0016
LEU 34MET 35 -0.1433
MET 35VAL 36 0.0329
VAL 36GLY 37 -0.0941
GLY 37GLY 38 0.1148
GLY 38VAL 39 -0.1184
VAL 39VAL 40 0.0051

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.