CNRS Nantes University US2B US2B
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***  conf_1  ***

CA strain for 2404230347031977915

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASP 1ALA 2 -0.1378
ALA 2GLU 3 0.0645
GLU 3PHE 4 -0.1237
PHE 4ARG 5 0.0040
ARG 5HIS 6 -0.0647
HIS 6ASP 7 0.0173
ASP 7SER 8 -0.1105
SER 8GLY 9 -0.0847
GLY 9TYR 10 0.1958
TYR 10GLU 11 -0.0037
GLU 11VAL 12 0.1031
VAL 12HIS 13 -0.2836
HIS 13HIS 14 -0.1152
HIS 14GLN 15 -0.0562
GLN 15LYS 16 -0.0086
LYS 16LEU 17 -0.0119
LEU 17VAL 18 0.1528
VAL 18PHE 19 0.0593
PHE 19PHE 20 0.1449
PHE 20ALA 21 -0.2281
ALA 21GLU 22 -0.1134
GLU 22ASP 23 0.0164
ASP 23VAL 24 0.0249
VAL 24GLY 25 -0.0473
GLY 25SER 26 -0.0427
SER 26ASN 27 0.0237
ASN 27LYS 28 -0.0736
LYS 28GLY 29 0.2911
GLY 29ALA 30 0.0912
ALA 30ILE 31 0.2614
ILE 31ILE 32 0.0097
ILE 32GLY 33 0.2222
GLY 33LEU 34 0.0655
LEU 34MET 35 -0.0465
MET 35VAL 36 -0.2232
VAL 36GLY 37 0.4479
GLY 37GLY 38 0.3399
GLY 38VAL 39 0.6559
VAL 39VAL 40 -0.3386

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.