CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  conf_1  ***

CA strain for 2404230347031977915

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASP 1ALA 2 0.0004
ALA 2GLU 3 -0.0232
GLU 3PHE 4 0.0740
PHE 4ARG 5 -0.0338
ARG 5HIS 6 0.2016
HIS 6ASP 7 -0.0059
ASP 7SER 8 0.0730
SER 8GLY 9 -0.1097
GLY 9TYR 10 0.1775
TYR 10GLU 11 0.0439
GLU 11VAL 12 -0.1373
VAL 12HIS 13 -0.1091
HIS 13HIS 14 -0.0258
HIS 14GLN 15 -0.1286
GLN 15LYS 16 0.0532
LYS 16LEU 17 0.0794
LEU 17VAL 18 -0.1239
VAL 18PHE 19 0.0609
PHE 19PHE 20 0.0473
PHE 20ALA 21 -0.2320
ALA 21GLU 22 0.0312
GLU 22ASP 23 0.0029
ASP 23VAL 24 0.0295
VAL 24GLY 25 -0.0200
GLY 25SER 26 -0.0552
SER 26ASN 27 -0.0328
ASN 27LYS 28 0.1501
LYS 28GLY 29 -0.0115
GLY 29ALA 30 0.0835
ALA 30ILE 31 -0.0236
ILE 31ILE 32 0.1275
ILE 32GLY 33 -0.0747
GLY 33LEU 34 -0.0633
LEU 34MET 35 0.1139
MET 35VAL 36 0.1410
VAL 36GLY 37 -0.1863
GLY 37GLY 38 -0.2475
GLY 38VAL 39 -0.3513
VAL 39VAL 40 0.0943

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.