CNRS Nantes University US2B US2B
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***  conf_1  ***

CA strain for 2404230347031977915

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASP 1ALA 2 0.0236
ALA 2GLU 3 -0.0224
GLU 3PHE 4 0.0342
PHE 4ARG 5 0.0145
ARG 5HIS 6 0.0108
HIS 6ASP 7 -0.0251
ASP 7SER 8 0.0197
SER 8GLY 9 -0.0271
GLY 9TYR 10 -0.0815
TYR 10GLU 11 0.0515
GLU 11VAL 12 -0.1089
VAL 12HIS 13 0.0460
HIS 13HIS 14 0.0707
HIS 14GLN 15 0.0402
GLN 15LYS 16 0.0057
LYS 16LEU 17 0.1079
LEU 17VAL 18 -0.1634
VAL 18PHE 19 0.0534
PHE 19PHE 20 0.0528
PHE 20ALA 21 -0.0562
ALA 21GLU 22 0.0571
GLU 22ASP 23 0.0326
ASP 23VAL 24 0.0693
VAL 24GLY 25 -0.0453
GLY 25SER 26 -0.0232
SER 26ASN 27 -0.0499
ASN 27LYS 28 0.0171
LYS 28GLY 29 0.1677
GLY 29ALA 30 0.0084
ALA 30ILE 31 -0.1131
ILE 31ILE 32 -0.0010
ILE 32GLY 33 0.0063
GLY 33LEU 34 0.0471
LEU 34MET 35 -0.0916
MET 35VAL 36 -0.0785
VAL 36GLY 37 0.0835
GLY 37GLY 38 0.0106
GLY 38VAL 39 -0.0189
VAL 39VAL 40 0.0731

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.