This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
ILE 2
-0.0430
ILE 2
SER 3
0.0623
SER 3
LEU 4
-0.0461
LEU 4
ILE 5
0.0037
ILE 5
ALA 6
-0.1526
ALA 6
ALA 7
-0.0421
ALA 7
LEU 8
-0.0252
LEU 8
ALA 9
0.0661
ALA 9
VAL 10
0.1174
VAL 10
ASP 11
-0.2160
ASP 11
ARG 12
0.1070
ARG 12
VAL 13
0.2163
VAL 13
ILE 14
-0.1004
ILE 14
GLY 15
0.0348
GLY 15
MET 16
0.1208
MET 16
GLU 17
-0.1155
GLU 17
ASN 18
-0.5860
ASN 18
ALA 19
0.3981
ALA 19
MET 20
0.1793
MET 20
PRO 21
-0.3128
PRO 21
TRP 22
0.2177
TRP 22
ASN 23
0.0696
ASN 23
LEU 24
-0.2228
LEU 24
PRO 25
0.0127
PRO 25
ALA 26
-0.1306
ALA 26
ASP 27
0.0681
ASP 27
LEU 28
0.0483
LEU 28
ALA 29
-0.1059
ALA 29
TRP 30
-0.1768
TRP 30
PHE 31
0.1020
PHE 31
LYS 32
-0.0484
LYS 32
ARG 33
0.0748
ARG 33
ASN 34
-0.0574
ASN 34
THR 35
0.0695
THR 35
LEU 36
-0.0168
LEU 36
ASP 37
-0.0096
ASP 37
LYS 38
-0.0252
LYS 38
PRO 39
-0.0168
PRO 39
VAL 40
-0.0335
VAL 40
ILE 41
0.1071
ILE 41
MET 42
-0.0613
MET 42
GLY 43
0.0856
GLY 43
ARG 44
0.2567
ARG 44
HIS 45
-0.0940
HIS 45
THR 46
0.0305
THR 46
TRP 47
-0.0672
TRP 47
GLU 48
-0.0625
GLU 48
SER 49
-0.1070
SER 49
ILE 50
-0.2744
ILE 50
GLY 51
0.0636
GLY 51
ARG 52
-0.0688
ARG 52
PRO 53
-0.0876
PRO 53
LEU 54
-0.1648
LEU 54
PRO 55
-0.0014
PRO 55
GLY 56
0.0639
GLY 56
ARG 57
-0.0191
ARG 57
LYS 58
-0.0764
LYS 58
ASN 59
-0.0263
ASN 59
ILE 60
0.0722
ILE 60
ILE 61
-0.0741
ILE 61
LEU 62
0.0827
LEU 62
SER 63
0.3802
SER 63
SER 64
-0.0295
SER 64
GLN 65
-0.0211
GLN 65
PRO 66
0.0300
PRO 66
GLY 67
-0.0804
GLY 67
THR 68
-0.0198
THR 68
ASP 69
-0.0945
ASP 69
ASP 70
-0.0778
ASP 70
ARG 71
-0.1128
ARG 71
VAL 72
0.0951
VAL 72
THR 73
0.1208
THR 73
TRP 74
-0.1596
TRP 74
VAL 75
0.1681
VAL 75
LYS 76
-0.0300
LYS 76
SER 77
0.2263
SER 77
VAL 78
0.3392
VAL 78
ASP 79
-0.0343
ASP 79
GLU 80
-0.0325
GLU 80
ALA 81
-0.0191
ALA 81
ILE 82
0.0638
ILE 82
ALA 83
0.0337
ALA 83
ALA 84
0.0936
ALA 84
CYS 85
-0.1477
CYS 85
GLY 86
-0.0161
GLY 86
ASP 87
-0.1610
ASP 87
VAL 88
-0.0002
VAL 88
PRO 89
-0.0436
PRO 89
GLU 90
0.0495
GLU 90
ILE 91
0.0219
ILE 91
MET 92
0.0520
MET 92
VAL 93
-0.0591
VAL 93
ILE 94
0.0603
ILE 94
GLY 95
0.0039
GLY 95
GLY 96
-0.0841
GLY 96
GLY 97
-0.1274
GLY 97
ARG 98
-0.0939
ARG 98
VAL 99
0.0058
VAL 99
TYR 100
0.2076
TYR 100
GLU 101
-0.0264
GLU 101
GLN 102
0.0901
GLN 102
PHE 103
-0.0691
PHE 103
LEU 104
0.3301
LEU 104
PRO 105
-0.0337
PRO 105
LYS 106
0.0095
LYS 106
ALA 107
0.0548
ALA 107
GLN 108
0.0148
GLN 108
LYS 109
-0.0543
LYS 109
LEU 110
0.0308
LEU 110
TYR 111
-0.1388
TYR 111
LEU 112
0.0509
LEU 112
THR 113
-0.0340
THR 113
HIS 114
0.0175
HIS 114
ILE 115
0.2498
ILE 115
ASP 116
0.0520
ASP 116
ALA 117
0.0579
ALA 117
GLU 118
-0.0442
GLU 118
VAL 119
-0.2297
VAL 119
GLU 120
-0.1223
GLU 120
GLY 121
-0.0031
GLY 121
ASP 122
-0.0390
ASP 122
THR 123
-0.1731
THR 123
HIS 124
0.1962
HIS 124
PHE 125
0.0875
PHE 125
PRO 126
0.0986
PRO 126
ASP 127
0.1413
ASP 127
TYR 128
0.0040
TYR 128
GLU 129
0.0956
GLU 129
PRO 130
-0.0117
PRO 130
ASP 131
0.0161
ASP 131
ASP 132
0.0952
ASP 132
TRP 133
-0.2274
TRP 133
GLU 134
0.1090
GLU 134
SER 135
-0.1533
SER 135
VAL 136
0.0078
VAL 136
PHE 137
-0.1923
PHE 137
SER 138
-0.0116
SER 138
GLU 139
-0.2571
GLU 139
PHE 140
0.0270
PHE 140
HIS 141
-0.1482
HIS 141
ASP 142
0.0922
ASP 142
ALA 143
0.0175
ALA 143
ASP 144
-0.0464
ASP 144
ALA 145
-0.1477
ALA 145
GLN 146
0.1551
GLN 146
ASN 147
-0.0290
ASN 147
SER 148
-0.1017
SER 148
HIS 149
0.0076
HIS 149
SER 150
0.1172
SER 150
TYR 151
-0.0155
TYR 151
CYS 152
0.0798
CYS 152
PHE 153
0.0438
PHE 153
GLU 154
-0.1926
GLU 154
ILE 155
0.0326
ILE 155
LEU 156
-0.1423
LEU 156
GLU 157
0.0181
GLU 157
ARG 158
0.0143
ARG 158
ARG 159
0.0691
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.