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***  1R88_unrelaxed_rank_001_alphafold2_ptm_model_3_seed_000  ***

CA strain for 240220085926145927

---  normal mode 16  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ALA 2 -0.0000
ALA 2PRO 3 0.0742
PRO 3TYR 4 0.0004
TYR 4GLU 5 -0.3908
GLU 5ASN 6 0.0001
ASN 6LEU 7 -0.2323
LEU 7MET 8 -0.0000
MET 8VAL 9 -0.0807
VAL 9PRO 10 -0.0004
PRO 10SER 11 -0.1677
SER 11PRO 12 -0.0001
PRO 12SER 13 -0.1529
SER 13MET 14 0.0000
MET 14GLY 15 0.3256
GLY 15ARG 16 0.0000
ARG 16ASP 17 -0.1287
ASP 17ILE 18 0.0000
ILE 18PRO 19 -0.2072
PRO 19VAL 20 0.0002
VAL 20ALA 21 -0.2002
ALA 21PHE 22 -0.0002
PHE 22LEU 23 -0.1863
LEU 23ALA 24 0.0001
ALA 24GLY 25 0.0253
GLY 25GLY 26 -0.0000
GLY 26PRO 27 -0.1124
PRO 27HIS 28 -0.0000
HIS 28ALA 29 -0.1718
ALA 29VAL 30 -0.0001
VAL 30TYR 31 -0.0823
TYR 31LEU 32 0.0000
LEU 32LEU 33 -0.4335
LEU 33ASP 34 0.0003
ASP 34ALA 35 -0.4566
ALA 35PHE 36 -0.0004
PHE 36ASN 37 0.1018
ASN 37ALA 38 -0.0001
ALA 38GLY 39 0.0898
GLY 39PRO 40 0.0002
PRO 40ASP 41 0.0371
ASP 41VAL 42 0.0004
VAL 42SER 43 0.1716
SER 43ASN 44 0.0002
ASN 44TRP 45 -0.0295
TRP 45VAL 46 0.0002
VAL 46THR 47 0.2451
THR 47ALA 48 0.0000
ALA 48GLY 49 -0.0248
GLY 49ASN 50 -0.0002
ASN 50ALA 51 -0.0673
ALA 51MET 52 -0.0001
MET 52ASN 53 -0.2809
ASN 53THR 54 0.0001
THR 54LEU 55 0.1033
LEU 55ALA 56 -0.0002
ALA 56GLY 57 -0.2437
GLY 57LYS 58 0.0002
LYS 58GLY 59 -0.0932
GLY 59ILE 60 0.0002
ILE 60SER 61 -0.0260
SER 61VAL 62 0.0001
VAL 62VAL 63 -0.0581
VAL 63ALA 64 -0.0001
ALA 64PRO 65 -0.1216
PRO 65ALA 66 0.0001
ALA 66GLY 67 -0.0572
GLY 67GLY 68 -0.0002
GLY 68ALA 69 -0.4809
ALA 69TYR 70 -0.0001
TYR 70SER 71 -0.0742
SER 71MET 72 0.0001
MET 72TYR 73 -0.2981
TYR 73THR 74 -0.0001
THR 74ASN 75 0.2615
ASN 75TRP 76 0.0002
TRP 76GLU 77 0.0823
GLU 77GLN 78 -0.0003
GLN 78ASP 79 0.1357
ASP 79GLY 80 0.0002
GLY 80SER 81 0.0466
SER 81LYS 82 -0.0002
LYS 82GLN 83 -0.0412
GLN 83TRP 84 0.0000
TRP 84ASP 85 0.3722
ASP 85THR 86 0.0002
THR 86PHE 87 -0.0184
PHE 87LEU 88 -0.0001
LEU 88SER 89 0.1687
SER 89ALA 90 -0.0002
ALA 90GLU 91 0.6329
GLU 91LEU 92 0.0003
LEU 92PRO 93 0.3526
PRO 93ASP 94 0.0003
ASP 94TRP 95 0.1522
TRP 95LEU 96 -0.0001
LEU 96ALA 97 0.0796
ALA 97ALA 98 0.0000
ALA 98ASN 99 -0.0031
ASN 99ARG 100 -0.0001
ARG 100GLY 101 -0.1190
GLY 101LEU 102 0.0001
LEU 102ALA 103 -0.1314
ALA 103PRO 104 -0.0003
PRO 104GLY 105 -0.0084
GLY 105GLY 106 0.0001
GLY 106HIS 107 0.0003
HIS 107ALA 108 -0.0004
ALA 108ALA 109 -0.4657
ALA 109VAL 110 -0.0000
VAL 110GLY 111 -0.5657
GLY 111ALA 112 0.0002
ALA 112ALA 113 -0.2163
ALA 113GLN 114 0.0004
GLN 114GLY 115 -0.1904
GLY 115GLY 116 0.0003
GLY 116TYR 117 0.1093
TYR 117GLY 118 -0.0002
GLY 118ALA 119 -0.1130
ALA 119MET 120 0.0001
MET 120ALA 121 0.1622
ALA 121LEU 122 -0.0002
LEU 122ALA 123 0.4101
ALA 123ALA 124 0.0003
ALA 124PHE 125 0.2819
PHE 125HIS 126 0.0003
HIS 126PRO 127 0.2901
PRO 127ASP 128 0.0000
ASP 128ARG 129 0.1023
ARG 129PHE 130 -0.0003
PHE 130GLY 131 0.4359
GLY 131PHE 132 -0.0004
PHE 132ALA 133 -0.3591
ALA 133GLY 134 0.0001
GLY 134SER 135 -0.4531
SER 135MET 136 -0.0004
MET 136SER 137 -0.4011
SER 137GLY 138 0.0000
GLY 138PHE 139 -0.0997
PHE 139LEU 140 0.0001
LEU 140TYR 141 -0.1439
TYR 141PRO 142 -0.0004
PRO 142SER 143 -0.1517
SER 143ASN 144 0.0000
ASN 144THR 145 -0.1053
THR 145THR 146 -0.0003
THR 146THR 147 -0.0003
THR 147ASN 148 -0.0000
ASN 148GLY 149 -0.0450
GLY 149ALA 150 0.0002
ALA 150ILE 151 -0.0705
ILE 151ALA 152 -0.0002
ALA 152ALA 153 -0.1440
ALA 153GLY 154 -0.0001
GLY 154MET 155 -0.0492
MET 155GLN 156 -0.0002
GLN 156GLN 157 -0.0619
GLN 157PHE 158 0.0002
PHE 158GLY 159 0.0294
GLY 159GLY 160 0.0002
GLY 160VAL 161 -0.1106
VAL 161ASP 162 0.0001
ASP 162THR 163 0.1918
THR 163ASN 164 0.0001
ASN 164GLY 165 -0.1810
GLY 165MET 166 -0.0003
MET 166TRP 167 0.0132
TRP 167GLY 168 -0.0003
GLY 168ALA 169 0.1724
ALA 169PRO 170 -0.0002
PRO 170GLN 171 -0.1959
GLN 171LEU 172 0.0002
LEU 172GLY 173 -0.0143
GLY 173ARG 174 0.0001
ARG 174TRP 175 -0.0593
TRP 175LYS 176 -0.0002
LYS 176TRP 177 -0.1485
TRP 177HIS 178 0.0002
HIS 178ASP 179 0.2605
ASP 179PRO 180 0.0001
PRO 180TRP 181 0.0586
TRP 181VAL 182 -0.0003
VAL 182HIS 183 -0.1012
HIS 183ALA 184 -0.0001
ALA 184SER 185 0.0122
SER 185LEU 186 0.0002
LEU 186LEU 187 0.0337
LEU 187ALA 188 -0.0005
ALA 188GLN 189 0.0752
GLN 189ASN 190 -0.0000
ASN 190ASN 191 0.0367
ASN 191THR 192 0.0003
THR 192ARG 193 0.0720
ARG 193VAL 194 -0.0001
VAL 194TRP 195 0.0759
TRP 195VAL 196 0.0002
VAL 196TRP 197 -0.0625
TRP 197SER 198 -0.0004
SER 198PRO 199 -0.1228
PRO 199THR 200 0.0001
THR 200ASN 201 -0.1099
ASN 201PRO 202 0.0002
PRO 202GLY 203 -0.0273
GLY 203ALA 204 -0.0003
ALA 204SER 205 -0.0744
SER 205ASP 206 0.0003
ASP 206PRO 207 -0.1195
PRO 207ALA 208 0.0002
ALA 208ALA 209 -0.0470
ALA 209MET 210 -0.0000
MET 210ILE 211 -0.0333
ILE 211GLY 212 -0.0002
GLY 212GLN 213 0.0391
GLN 213ALA 214 -0.0000
ALA 214ALA 215 -0.1072
ALA 215GLU 216 0.0002
GLU 216ALA 217 -0.2124
ALA 217MET 218 -0.0000
MET 218GLY 219 -0.0012
GLY 219ASN 220 -0.0003
ASN 220SER 221 -0.1795
SER 221ARG 222 0.0004
ARG 222MET 223 0.0944
MET 223PHE 224 -0.0000
PHE 224TYR 225 0.0094
TYR 225ASN 226 0.0003
ASN 226GLN 227 0.0422
GLN 227TYR 228 -0.0001
TYR 228ARG 229 0.0415
ARG 229SER 230 -0.0000
SER 230VAL 231 0.0868
VAL 231GLY 232 -0.0002
GLY 232GLY 233 0.0529
GLY 233HIS 234 -0.0001
HIS 234ASN 235 0.2557
ASN 235GLY 236 -0.0002
GLY 236HIS 237 0.0181
HIS 237PHE 238 0.0003
PHE 238ASP 239 -0.0566
ASP 239PHE 240 0.0000
PHE 240PRO 241 0.0419
PRO 241ALA 242 -0.0001
ALA 242SER 243 -0.0151
SER 243GLY 244 0.0001
GLY 244ASP 245 0.0998
ASP 245ASN 246 0.0003
ASN 246GLY 247 -0.0535
GLY 247TRP 248 -0.0000
TRP 248GLY 249 -0.0349
GLY 249SER 250 -0.0001
SER 250TRP 251 -0.0812
TRP 251ALA 252 0.0001
ALA 252PRO 253 0.1035
PRO 253GLN 254 0.0002
GLN 254LEU 255 -0.0941
LEU 255GLY 256 -0.0003
GLY 256ALA 257 0.4138
ALA 257MET 258 -0.0002
MET 258SER 259 -0.0650
SER 259GLY 260 -0.0001
GLY 260ASP 261 0.3938
ASP 261ILE 262 -0.0001
ILE 262VAL 263 -0.3111
VAL 263GLY 264 -0.0001
GLY 264ALA 265 0.1691
ALA 265ILE 266 0.0001
ILE 266ARG 267 0.1297

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.