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***  pdz  ***

CA strain for 23011717530784080

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1GLY 2 0.0054
GLY 2SER 3 0.0075
SER 3MET 4 -0.0342
MET 4ARG 5 0.0107
ARG 5PRO 6 0.0021
PRO 6PRO 7 -0.0060
PRO 7ILE 8 0.0075
ILE 8ILE 9 -0.0078
ILE 9ILE 10 -0.0032
ILE 10HIS 11 -0.0005
HIS 11ARG 12 0.0070
ARG 12ALA 13 0.0123
ALA 13GLY 14 -0.0038
GLY 14LYS 15 -0.0070
LYS 15LYS 16 -0.0108
LYS 16TYR 17 -0.0047
TYR 17GLY 18 0.0158
GLY 18PHE 19 -0.0411
PHE 19THR 20 -0.0972
THR 20LEU 21 0.0221
LEU 21ARG 22 -0.0727
ARG 22ALA 23 -0.0555
ALA 23ILE 24 -0.1446
ILE 24ARG 25 -0.2843
ARG 25VAL 26 0.1502
VAL 26TYR 27 -0.3352
TYR 27MET 28 0.0486
MET 28GLY 29 0.0000
GLY 29ASP 30 -0.0603
ASP 30SER 31 0.0632
SER 31ASP 32 0.0484
ASP 32VAL 33 0.0100
VAL 33TYR 34 0.0547
TYR 34THR 35 0.1934
THR 35VAL 36 0.1104
VAL 36HIS 37 -0.0001
HIS 37HIS 38 -0.0056
HIS 38MET 39 -0.0081
MET 39VAL 40 -0.1166
VAL 40TRP 41 0.0472
TRP 41HIS 42 -0.0986
HIS 42VAL 43 -0.0387
VAL 43GLU 44 -0.0108
GLU 44ASP 45 -0.0030
ASP 45GLY 46 -0.0013
GLY 46GLY 47 0.0060
GLY 47PRO 48 0.0028
PRO 48ALA 49 0.0057
ALA 49SER 50 0.0104
SER 50GLU 51 -0.0214
GLU 51ALA 52 0.0175
ALA 52GLY 53 0.0065
GLY 53LEU 54 -0.0180
LEU 54ARG 55 0.0391
ARG 55GLN 56 0.0222
GLN 56GLY 57 -0.0546
GLY 57ASP 58 0.0455
ASP 58LEU 59 -0.0732
LEU 59ILE 60 -0.0162
ILE 60THR 61 0.0191
THR 61HIS 62 -0.0081
HIS 62VAL 63 -0.0249
VAL 63ASN 64 0.0114
ASN 64GLY 65 0.0254
GLY 65GLU 66 0.0134
GLU 66PRO 67 0.0688
PRO 67VAL 68 -0.0352
VAL 68HIS 69 0.1199
HIS 69GLY 70 -0.0331
GLY 70LEU 71 0.1434
LEU 71VAL 72 -0.0338
VAL 72HIS 73 0.0232
HIS 73THR 74 -0.0104
THR 74GLU 75 -0.0231
GLU 75VAL 76 -0.0041
VAL 76VAL 77 0.0183
VAL 77GLU 78 -0.0144
GLU 78LEU 79 -0.0366
LEU 79ILE 80 0.0437
ILE 80LEU 81 -0.0102
LEU 81LYS 82 0.0060
LYS 82SER 83 -0.0151
SER 83GLY 84 0.0287
GLY 84ASN 85 0.0154
ASN 85LYS 86 -0.0002
LYS 86VAL 87 0.0197
VAL 87ALA 88 -0.0081
ALA 88ILE 89 -0.0134
ILE 89SER 90 -0.0091
SER 90THR 91 -0.0132
THR 91THR 92 0.0058
THR 92PRO 93 -0.0356
PRO 93LEU 94 0.0113
LEU 94GLU 95 0.0670
GLU 95ASN 96 0.0249

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.