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***  pdz  ***

CA strain for 23011717530784080

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1GLY 2 -0.0047
GLY 2SER 3 0.0616
SER 3MET 4 0.0809
MET 4ARG 5 -0.0038
ARG 5PRO 6 0.0113
PRO 6PRO 7 -0.0353
PRO 7ILE 8 -0.0018
ILE 8ILE 9 0.0242
ILE 9ILE 10 0.0084
ILE 10HIS 11 -0.0112
HIS 11ARG 12 -0.0048
ARG 12ALA 13 0.0384
ALA 13GLY 14 0.0126
GLY 14LYS 15 -0.0532
LYS 15LYS 16 0.0014
LYS 16TYR 17 -0.0012
TYR 17GLY 18 0.0056
GLY 18PHE 19 0.0230
PHE 19THR 20 -0.0068
THR 20LEU 21 0.0995
LEU 21ARG 22 -0.1229
ARG 22ALA 23 0.2299
ALA 23ILE 24 -0.2505
ILE 24ARG 25 0.2342
ARG 25VAL 26 -0.0843
VAL 26TYR 27 0.1429
TYR 27MET 28 -0.1193
MET 28GLY 29 0.1920
GLY 29ASP 30 0.1245
ASP 30SER 31 -0.0129
SER 31ASP 32 0.0295
ASP 32VAL 33 -0.0710
VAL 33TYR 34 0.0173
TYR 34THR 35 -0.2861
THR 35VAL 36 0.2853
VAL 36HIS 37 -0.1559
HIS 37HIS 38 -0.0654
HIS 38MET 39 -0.0129
MET 39VAL 40 -0.0409
VAL 40TRP 41 0.0119
TRP 41HIS 42 -0.0306
HIS 42VAL 43 0.0521
VAL 43GLU 44 -0.0624
GLU 44ASP 45 0.0130
ASP 45GLY 46 -0.0126
GLY 46GLY 47 0.0147
GLY 47PRO 48 0.0311
PRO 48ALA 49 -0.0472
ALA 49SER 50 0.0018
SER 50GLU 51 0.0181
GLU 51ALA 52 -0.0368
ALA 52GLY 53 0.0034
GLY 53LEU 54 0.0416
LEU 54ARG 55 -0.0829
ARG 55GLN 56 0.0243
GLN 56GLY 57 -0.0856
GLY 57ASP 58 -0.0159
ASP 58LEU 59 -0.1274
LEU 59ILE 60 0.0236
ILE 60THR 61 -0.0247
THR 61HIS 62 0.0838
HIS 62VAL 63 0.0857
VAL 63ASN 64 0.0106
ASN 64GLY 65 0.0639
GLY 65GLU 66 -0.0730
GLU 66PRO 67 0.0501
PRO 67VAL 68 -0.0174
VAL 68HIS 69 0.1336
HIS 69GLY 70 -0.2768
GLY 70LEU 71 0.2127
LEU 71VAL 72 -0.1536
VAL 72HIS 73 0.0856
HIS 73THR 74 -0.0412
THR 74GLU 75 -0.0198
GLU 75VAL 76 0.0033
VAL 76VAL 77 0.0449
VAL 77GLU 78 -0.0652
GLU 78LEU 79 0.0125
LEU 79ILE 80 0.0609
ILE 80LEU 81 -0.0093
LEU 81LYS 82 0.0471
LYS 82SER 83 -0.0238
SER 83GLY 84 0.0615
GLY 84ASN 85 -0.0022
ASN 85LYS 86 0.0167
LYS 86VAL 87 0.0171
VAL 87ALA 88 0.0391
ALA 88ILE 89 0.0117
ILE 89SER 90 0.0442
SER 90THR 91 0.0110
THR 91THR 92 -0.0582
THR 92PRO 93 0.0962
PRO 93LEU 94 -0.0543
LEU 94GLU 95 -0.2177
GLU 95ASN 96 -0.0234

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.