This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
TYR 1
TYR 2
-0.4199
TYR 2
ASP 3
0.2261
ASP 3
PRO 4
-0.0195
PRO 4
GLU 5
-0.1326
GLU 5
THR 6
0.0920
THR 6
GLY 7
-0.1924
GLY 7
THR 8
0.3638
THR 8
TRP 9
1.2963
TRP 9
TYR 10
0.0210
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.