This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
CYS 10
PRO 11
-0.0394
PRO 11
LEU 12
0.0418
LEU 12
MET 13
-0.2277
MET 13
VAL 14
-0.0550
VAL 14
LYS 15
-0.1059
LYS 15
VAL 16
-0.1887
VAL 16
LEU 17
-0.0205
LEU 17
ASP 18
-0.1692
ASP 18
ALA 19
0.0019
ALA 19
VAL 20
-0.0665
VAL 20
ARG 21
-0.0199
ARG 21
GLY 22
0.0363
GLY 22
SER 23
0.0553
SER 23
PRO 24
-0.0588
PRO 24
ALA 25
0.0453
ALA 25
ILE 26
0.0774
ILE 26
ASN 27
0.0941
ASN 27
VAL 28
0.0506
VAL 28
ALA 29
0.2026
ALA 29
VAL 30
0.0204
VAL 30
HIS 31
0.1154
HIS 31
VAL 32
0.1508
VAL 32
PHE 33
0.0043
PHE 33
ARG 34
0.2474
ARG 34
LYS 35
-0.1410
LYS 35
ALA 36
0.0369
ALA 36
ALA 37
0.0489
ALA 37
ASP 38
-0.1354
ASP 38
ASP 39
0.0677
ASP 39
THR 40
-0.0044
THR 40
TRP 41
0.2363
TRP 41
GLU 42
-0.0529
GLU 42
PRO 43
0.0043
PRO 43
PHE 44
0.0424
PHE 44
ALA 45
-0.1316
ALA 45
SER 46
0.0338
SER 46
GLY 47
0.0002
GLY 47
LYS 48
0.0550
LYS 48
THR 49
0.0440
THR 49
SER 50
0.0683
SER 50
GLU 51
-0.0276
GLU 51
SER 52
0.0012
SER 52
GLY 53
0.0159
GLY 53
GLU 54
-0.1524
GLU 54
LEU 55
-0.0043
LEU 55
HIS 56
-0.0305
HIS 56
GLY 57
-0.1354
GLY 57
LEU 58
-0.0693
LEU 58
THR 59
0.0773
THR 59
THR 60
0.0265
THR 60
GLU 61
0.1014
GLU 61
GLU 62
-0.0421
GLU 62
GLU 63
0.0080
GLU 63
PHE 64
0.0093
PHE 64
VAL 65
-0.0750
VAL 65
GLU 66
0.0575
GLU 66
GLY 67
-0.0541
GLY 67
ILE 68
0.0377
ILE 68
TYR 69
-0.0333
TYR 69
LYS 70
0.2700
LYS 70
VAL 71
0.1667
VAL 71
GLU 72
0.0479
GLU 72
ILE 73
0.2247
ILE 73
ASP 74
-0.0204
ASP 74
THR 75
0.1545
THR 75
LYS 76
-0.0587
LYS 76
SER 77
-0.1108
SER 77
TYR 78
-0.0373
TYR 78
TRP 79
-0.0454
TRP 79
LYS 80
-0.0832
LYS 80
ALA 81
-0.0711
ALA 81
LEU 82
0.0226
LEU 82
GLY 83
-0.1208
GLY 83
ILE 84
0.0061
ILE 84
SER 85
-0.0673
SER 85
PRO 86
0.0559
PRO 86
PHE 87
-0.1155
PHE 87
HIS 88
0.1727
HIS 88
GLU 89
-0.0410
GLU 89
HIS 90
0.0059
HIS 90
ALA 91
0.0330
ALA 91
GLU 92
0.2491
GLU 92
VAL 93
0.1717
VAL 93
VAL 94
0.0927
VAL 94
PHE 95
0.1813
PHE 95
THR 96
0.0258
THR 96
ALA 97
0.0326
ALA 97
ASN 98
0.1431
ASN 98
ASP 99
-0.0501
ASP 99
SER 100
0.0203
SER 100
GLY 101
0.0439
GLY 101
PRO 102
0.0491
PRO 102
ARG 103
-0.0658
ARG 103
ARG 104
-0.1436
ARG 104
TYR 105
0.0669
TYR 105
THR 106
-0.3233
THR 106
ILE 107
0.0351
ILE 107
ALA 108
-0.2709
ALA 108
ALA 109
-0.2279
ALA 109
LEU 110
-0.0681
LEU 110
LEU 111
-0.0796
LEU 111
SER 112
-0.0349
SER 112
PRO 113
-0.0610
PRO 113
TYR 114
-0.0178
TYR 114
SER 115
-0.0322
SER 115
TYR 116
-0.0081
TYR 116
SER 117
-0.0801
SER 117
THR 118
-0.0090
THR 118
MET 119
-0.0228
MET 119
ALA 120
-0.2155
ALA 120
VAL 121
0.1245
VAL 121
VAL 122
-0.1588
VAL 122
THR 123
0.0089
THR 123
ASN 124
-0.0440
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.