This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
CYS 10
PRO 11
-0.0087
PRO 11
LEU 12
-0.0536
LEU 12
MET 13
-0.2123
MET 13
VAL 14
-0.1220
VAL 14
LYS 15
-0.2344
LYS 15
VAL 16
-0.2124
VAL 16
LEU 17
-0.1061
LEU 17
ASP 18
-0.2217
ASP 18
ALA 19
-0.0039
ALA 19
VAL 20
-0.0876
VAL 20
ARG 21
-0.0281
ARG 21
GLY 22
0.0550
GLY 22
SER 23
0.0430
SER 23
PRO 24
-0.1153
PRO 24
ALA 25
0.0232
ALA 25
ILE 26
0.1385
ILE 26
ASN 27
0.0722
ASN 27
VAL 28
-0.0256
VAL 28
ALA 29
0.0180
ALA 29
VAL 30
0.0093
VAL 30
HIS 31
-0.2879
HIS 31
VAL 32
0.1881
VAL 32
PHE 33
-0.3118
PHE 33
ARG 34
0.1754
ARG 34
LYS 35
0.1406
LYS 35
ALA 36
-0.0168
ALA 36
ALA 37
-0.0571
ALA 37
ASP 38
0.1512
ASP 38
ASP 39
-0.0356
ASP 39
THR 40
-0.0217
THR 40
TRP 41
-0.3867
TRP 41
GLU 42
0.1597
GLU 42
PRO 43
-0.3035
PRO 43
PHE 44
0.0776
PHE 44
ALA 45
-0.0498
ALA 45
SER 46
0.0421
SER 46
GLY 47
-0.1944
GLY 47
LYS 48
-0.1533
LYS 48
THR 49
-0.0419
THR 49
SER 50
-0.0225
SER 50
GLU 51
-0.1425
GLU 51
SER 52
0.0693
SER 52
GLY 53
0.0159
GLY 53
GLU 54
-0.2123
GLU 54
LEU 55
-0.1532
LEU 55
HIS 56
-0.0576
HIS 56
GLY 57
-0.2025
GLY 57
LEU 58
-0.0306
LEU 58
THR 59
-0.0387
THR 59
THR 60
0.0378
THR 60
GLU 61
-0.0659
GLU 61
GLU 62
-0.1797
GLU 62
GLU 63
0.1398
GLU 63
PHE 64
-0.1311
PHE 64
VAL 65
-0.0942
VAL 65
GLU 66
-0.3333
GLU 66
GLY 67
0.2515
GLY 67
ILE 68
0.1021
ILE 68
TYR 69
0.0473
TYR 69
LYS 70
0.3347
LYS 70
VAL 71
-0.2878
VAL 71
GLU 72
0.1554
GLU 72
ILE 73
-0.1557
ILE 73
ASP 74
0.0039
ASP 74
THR 75
0.1020
THR 75
LYS 76
-0.0384
LYS 76
SER 77
-0.1019
SER 77
TYR 78
0.0018
TYR 78
TRP 79
-0.0803
TRP 79
LYS 80
-0.0492
LYS 80
ALA 81
-0.0495
ALA 81
LEU 82
0.0307
LEU 82
GLY 83
-0.1402
GLY 83
ILE 84
0.0298
ILE 84
SER 85
-0.0665
SER 85
PRO 86
0.0615
PRO 86
PHE 87
-0.1367
PHE 87
HIS 88
0.2009
HIS 88
GLU 89
-0.0621
GLU 89
HIS 90
0.0420
HIS 90
ALA 91
0.0230
ALA 91
GLU 92
0.1473
GLU 92
VAL 93
0.3206
VAL 93
VAL 94
-0.1295
VAL 94
PHE 95
0.0515
PHE 95
THR 96
0.1342
THR 96
ALA 97
-0.0587
ALA 97
ASN 98
0.1672
ASN 98
ASP 99
-0.2609
ASP 99
SER 100
0.1595
SER 100
GLY 101
-0.0552
GLY 101
PRO 102
-0.2685
PRO 102
ARG 103
-0.1053
ARG 103
ARG 104
-0.1987
ARG 104
TYR 105
-0.0180
TYR 105
THR 106
-0.1866
THR 106
ILE 107
-0.0984
ILE 107
ALA 108
-0.2724
ALA 108
ALA 109
-0.2446
ALA 109
LEU 110
-0.1346
LEU 110
LEU 111
-0.0816
LEU 111
SER 112
-0.0530
SER 112
PRO 113
-0.0686
PRO 113
TYR 114
-0.0182
TYR 114
SER 115
-0.0319
SER 115
TYR 116
-0.0264
TYR 116
SER 117
-0.0976
SER 117
THR 118
-0.0481
THR 118
MET 119
-0.1228
MET 119
ALA 120
-0.1534
ALA 120
VAL 121
0.0306
VAL 121
VAL 122
-0.1326
VAL 122
THR 123
-0.0149
THR 123
ASN 124
-0.1149
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.