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***  VIRAL PROTEIN/RNA BINDING PROTEIN 31-JUL-12 4B4N  ***

CA strain for 22101122370966482

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1ILE 2 0.0955
ILE 2VAL 3 -0.1908
VAL 3GLN 4 -0.1651
GLN 4ASN 5 -0.0165
ASN 5LEU 6 -0.0744
LEU 6GLN 7 -0.0080
GLN 7GLY 8 0.0570
GLY 8GLN 9 -0.0307
GLN 9MET 10 0.2121
MET 10VAL 11 -0.2088
VAL 11HIS 12 0.0677
HIS 12GLN 13 0.0355
GLN 13ALA 14 -0.1017
ALA 14ILE 15 -0.0371
ILE 15SER 16 0.0109
SER 16PRO 17 -0.1274
PRO 17ARG 18 0.0357
ARG 18THR 19 0.0104
THR 19LEU 20 -0.0081
LEU 20ASN 21 0.0245
ASN 21ALA 22 0.0028
ALA 22TRP 23 0.0177
TRP 23VAL 24 -0.0024
VAL 24LYS 25 0.0326
LYS 25VAL 26 -0.0048
VAL 26VAL 27 -0.0003
VAL 27GLU 28 0.0142
GLU 28GLU 29 0.0094
GLU 29LYS 30 -0.0077
LYS 30ALA 31 0.0130
ALA 31PHE 32 -0.0067
PHE 32SER 33 0.0210
SER 33PRO 34 0.0029
PRO 34GLU 35 0.0016
GLU 35VAL 36 0.0052
VAL 36ILE 37 -0.0101
ILE 37PRO 38 0.0132
PRO 38MET 39 0.0162
MET 39PHE 40 -0.0029
PHE 40SER 41 -0.0009
SER 41ALA 42 0.0240
ALA 42LEU 43 0.0292
LEU 43SER 44 -0.0325
SER 44GLU 45 -0.0321
GLU 45GLY 46 -0.0196
GLY 46ALA 47 -0.0493
ALA 47THR 48 -0.0367
THR 48PRO 49 -0.0132
PRO 49GLN 50 -0.0141
GLN 50ASP 51 -0.0266
ASP 51LEU 52 -0.0378
LEU 52ASN 53 -0.0280
ASN 53THR 54 -0.0153
THR 54MET 55 0.0261
MET 55LEU 56 -0.0347
LEU 56ASN 57 0.0071
ASN 57THR 58 0.0498
THR 58VAL 59 -0.0582
VAL 59GLY 60 -0.0022
GLY 60GLY 61 -0.0075
GLY 61HIS 62 0.0051
HIS 62GLN 63 0.0159
GLN 63ALA 64 -0.0048
ALA 64ALA 65 -0.0002
ALA 65MET 66 -0.0002
MET 66GLN 67 -0.0145
GLN 67MET 68 0.0265
MET 68LEU 69 -0.0091
LEU 69LYS 70 0.0136
LYS 70GLU 71 -0.0165
GLU 71THR 72 0.0043
THR 72ILE 73 0.0021
ILE 73ASN 74 -0.0138
ASN 74GLU 75 -0.0168
GLU 75GLU 76 0.0088
GLU 76ALA 77 0.0028
ALA 77ALA 78 -0.0156
ALA 78GLU 79 -0.0175
GLU 79TRP 80 0.0325
TRP 80ASP 81 0.0145
ASP 81ARG 82 -0.0134
ARG 82LEU 83 0.0018
LEU 83HIS 84 0.0080
HIS 84PRO 85 0.0238
PRO 85VAL 86 -0.0142
VAL 86ARG 97 0.0580
ARG 97GLU 98 -0.0026
GLU 98PRO 99 -0.0129
PRO 99ARG 100 0.0456
ARG 100GLY 101 0.0138
GLY 101SER 102 -0.0150
SER 102ASP 103 0.0490
ASP 103ILE 104 -0.0203
ILE 104ALA 105 0.0232
ALA 105GLY 106 0.0014
GLY 106THR 107 -0.0224
THR 107THR 108 0.0454
THR 108SER 109 0.0116
SER 109THR 110 -0.0089
THR 110LEU 111 -0.0511
LEU 111GLN 112 0.0090
GLN 112GLU 113 -0.0149
GLU 113GLN 114 -0.0039
GLN 114ILE 115 0.0699
ILE 115GLY 116 -0.0693
GLY 116TRP 117 -0.0086
TRP 117MET 118 0.0923
MET 118THR 119 -0.0090
THR 119HIS 120 0.2672
HIS 120ASN 121 -0.0087
ASN 121PRO 122 -0.0038
PRO 122PRO 123 0.0022
PRO 123ILE 124 0.0305
ILE 124PRO 125 -0.0924
PRO 125VAL 126 -0.0059
VAL 126GLY 127 -0.0402
GLY 127GLU 128 0.0193
GLU 128ILE 129 0.0151
ILE 129TYR 130 0.0044
TYR 130LYS 131 -0.0130
LYS 131ARG 132 0.0265
ARG 132ARG 132 0.1436
ARG 132TRP 133 0.0016
TRP 133ILE 134 -0.0046
ILE 134ILE 135 0.0014
ILE 135LEU 136 0.0145
LEU 136GLY 137 -0.0027
GLY 137LEU 138 0.0057
LEU 138ASN 139 0.0034
ASN 139LYS 140 0.0104
LYS 140ILE 141 -0.0028
ILE 141VAL 142 0.0177
VAL 142ARG 143 -0.0003
ARG 143MET 144 0.0005
MET 144TYR 145 -0.0021
TYR 145SER 146 0.0002
SER 146PRO 322 0.0124
PRO 322VAL 323 0.0150
VAL 323LEU 324 0.0305
LEU 324PHE 325 -0.0034
PHE 325PRO 326 0.0136
PRO 326GLY 327 -0.0008
GLY 327GLN 328 0.0172
GLN 328PRO 329 -0.0209
PRO 329PHE 330 -0.0071
PHE 330GLY 331 0.0409
GLY 331GLN 332 -0.0246
GLN 332PRO 333 0.0149
PRO 333PRO 334 -0.0081
PRO 334LEU 335 0.0122
LEU 335GLY 336 -0.0049

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.