This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
GLN 2
0.0501
GLN 2
ILE 3
0.0144
ILE 3
PHE 4
0.0627
PHE 4
VAL 5
0.0697
VAL 5
LYS 6
0.0042
LYS 6
THR 7
0.1000
THR 7
LEU 8
-0.0405
LEU 8
THR 9
-0.0337
THR 9
GLY 10
0.1481
GLY 10
LYS 11
-0.0333
LYS 11
THR 12
0.0607
THR 12
ILE 13
-0.0269
ILE 13
THR 14
0.0727
THR 14
LEU 15
0.0002
LEU 15
GLU 16
0.0313
GLU 16
VAL 17
0.0363
VAL 17
GLU 18
0.0140
GLU 18
PRO 19
0.0032
PRO 19
SER 20
0.0006
SER 20
ASP 21
-0.0121
ASP 21
THR 22
-0.0414
THR 22
ILE 23
-0.0268
ILE 23
GLU 24
0.0012
GLU 24
ASN 25
-0.0486
ASN 25
VAL 26
0.0175
VAL 26
LYS 27
-0.1320
LYS 27
ALA 28
0.0535
ALA 28
LYS 29
-0.1072
LYS 29
ILE 30
0.0508
ILE 30
GLN 31
-0.0569
GLN 31
ASP 32
-0.0145
ASP 32
LYS 33
-0.0172
LYS 33
GLU 34
0.0314
GLU 34
GLY 35
-0.0263
GLY 35
ILE 36
0.0019
ILE 36
PRO 37
-0.0029
PRO 37
PRO 38
-0.0459
PRO 38
ASP 39
-0.5264
ASP 39
GLN 40
0.1063
GLN 40
GLN 41
-0.1555
GLN 41
ARG 42
0.0975
ARG 42
LEU 43
-0.0375
LEU 43
ILE 44
0.0105
ILE 44
PHE 45
0.0652
PHE 45
ALA 46
-0.0009
ALA 46
GLY 47
0.0059
GLY 47
LYS 48
0.0043
LYS 48
GLN 49
-0.0015
GLN 49
LEU 50
0.0176
LEU 50
GLU 51
-0.0063
GLU 51
ASP 52
0.0584
ASP 52
GLY 53
-0.1047
GLY 53
ARG 54
0.0030
ARG 54
THR 55
-0.0007
THR 55
LEU 56
0.0153
LEU 56
SER 57
-0.0075
SER 57
ASP 58
0.0036
ASP 58
TYR 59
0.0177
TYR 59
ASN 60
-0.0443
ASN 60
ILE 61
0.0131
ILE 61
GLN 62
-0.0265
GLN 62
LYS 63
-0.0139
LYS 63
GLU 64
0.0054
GLU 64
SER 65
-0.0046
SER 65
THR 66
0.1066
THR 66
LEU 67
0.0059
LEU 67
HSE 68
0.0931
HSE 68
LEU 69
0.0880
LEU 69
VAL 70
0.0748
VAL 70
LEU 71
0.1987
LEU 71
ARG 72
0.1754
ARG 72
LEU 73
0.0513
LEU 73
ARG 74
0.2082
ARG 74
GLY 75
-0.0568
GLY 75
GLY 76
-0.0935
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.