This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
GLN 2
0.0099
GLN 2
ILE 3
0.0069
ILE 3
PHE 4
0.0102
PHE 4
VAL 5
0.0135
VAL 5
LYS 6
0.0012
LYS 6
THR 7
0.0164
THR 7
LEU 8
-0.0045
LEU 8
THR 9
-0.0086
THR 9
GLY 10
0.0206
GLY 10
LYS 11
-0.0015
LYS 11
THR 12
0.0087
THR 12
ILE 13
-0.0039
ILE 13
THR 14
0.0109
THR 14
LEU 15
0.0044
LEU 15
GLU 16
0.0059
GLU 16
VAL 17
0.0073
VAL 17
GLU 18
0.0011
GLU 18
PRO 19
-0.0002
PRO 19
SER 20
0.0001
SER 20
ASP 21
-0.0028
ASP 21
THR 22
-0.0059
THR 22
ILE 23
-0.0035
ILE 23
GLU 24
-0.0035
GLU 24
ASN 25
-0.0087
ASN 25
VAL 26
0.0036
VAL 26
LYS 27
-0.0273
LYS 27
ALA 28
0.0144
ALA 28
LYS 29
-0.0250
LYS 29
ILE 30
0.0086
ILE 30
GLN 31
-0.0198
GLN 31
ASP 32
-0.0085
ASP 32
LYS 33
-0.0004
LYS 33
GLU 34
-0.0014
GLU 34
GLY 35
-0.0154
GLY 35
ILE 36
0.0004
ILE 36
PRO 37
-0.0229
PRO 37
PRO 38
0.0010
PRO 38
ASP 39
-0.1401
ASP 39
GLN 40
0.0433
GLN 40
GLN 41
-0.0249
GLN 41
ARG 42
-0.0005
ARG 42
LEU 43
0.0265
LEU 43
ILE 44
-0.0024
ILE 44
PHE 45
0.0312
PHE 45
ALA 46
-0.0038
ALA 46
GLY 47
0.0020
GLY 47
LYS 48
-0.0033
LYS 48
GLN 49
0.0179
GLN 49
LEU 50
0.0071
LEU 50
GLU 51
-0.0075
GLU 51
ASP 52
0.0054
ASP 52
GLY 53
-0.0109
GLY 53
ARG 54
-0.0001
ARG 54
THR 55
0.0002
THR 55
LEU 56
0.0005
LEU 56
SER 57
-0.0009
SER 57
ASP 58
0.0006
ASP 58
TYR 59
0.0008
TYR 59
ASN 60
0.0043
ASN 60
ILE 61
-0.0022
ILE 61
GLN 62
0.0018
GLN 62
LYS 63
-0.0037
LYS 63
GLU 64
0.0000
GLU 64
SER 65
0.0066
SER 65
THR 66
0.0181
THR 66
LEU 67
0.0037
LEU 67
HSE 68
0.0220
HSE 68
LEU 69
0.0174
LEU 69
VAL 70
0.0274
VAL 70
LEU 71
0.0506
LEU 71
ARG 72
0.0555
ARG 72
LEU 73
0.1226
LEU 73
ARG 74
0.0001
ARG 74
GLY 75
-0.1339
GLY 75
GLY 76
-0.0251
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.