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***  fvii  ***

CA strain for 22081221180863076

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ASN 2 -0.0072
ASN 2ALA 3 0.0001
ALA 3PHE 4 -0.0071
PHE 4LEU 5 0.0008
LEU 5CGU 6 0.0012
CGU 6CGU 7 0.0009
CGU 7LEU 8 -0.0048
LEU 8ARG 9 0.0048
ARG 9PRO 10 0.0024
PRO 10GLY 11 0.0002
GLY 11SER 12 -0.0014
SER 12LEU 13 0.0129
LEU 13CGU 14 -0.0073
CGU 14ARG 15 0.0025
ARG 15CGU 16 0.0010
CGU 16CYS 17 0.0021
CYS 17LYS 18 0.0011
LYS 18CGU 19 -0.0065
CGU 19CGU 20 0.0034
CGU 20GLN 21 0.0056
GLN 21CYS 22 0.0056
CYS 22SER 23 0.0033
SER 23PHE 24 0.0129
PHE 24CGU 25 -0.0160
CGU 25CGU 26 0.0006
CGU 26ALA 27 0.0021
ALA 27ARG 28 0.0028
ARG 28CGU 29 -0.0018
CGU 29ILE 30 0.0020
ILE 30PHE 31 -0.0017
PHE 31LYS 32 0.0039
LYS 32ASP 33 0.0018
ASP 33ALA 34 -0.0031
ALA 34CGU 35 0.0060
CGU 35ARG 36 -0.0025
ARG 36THR 37 -0.0004
THR 37LYS 38 0.0003
LYS 38LEU 39 0.0026
LEU 39PHE 40 -0.0170
PHE 40TRP 41 -0.0102
TRP 41ILE 42 0.0072
ILE 42SER 43 0.0035
SER 43TYR 44 -0.0288
TYR 44SER 45 0.0509
SER 45ASP 46 -0.0548
ASP 46GLY 47 -0.1408
GLY 47ASP 48 -0.0604
ASP 48GLN 49 0.0182
GLN 49CYS 50 -0.0186
CYS 50ALA 51 -0.0167
ALA 51SER 52 0.0023

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.