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***  fvii  ***

CA strain for 22081221180863076

---  normal mode 29  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ASN 2 -0.2917
ASN 2ALA 3 0.0600
ALA 3PHE 4 -0.1696
PHE 4LEU 5 0.0255
LEU 5CGU 6 -0.4305
CGU 6CGU 7 0.1964
CGU 7LEU 8 -0.4979
LEU 8ARG 9 -0.0648
ARG 9PRO 10 -0.0031
PRO 10GLY 11 0.3273
GLY 11SER 12 -0.0695
SER 12LEU 13 0.1812
LEU 13CGU 14 -0.5519
CGU 14ARG 15 -0.0022
ARG 15CGU 16 0.1068
CGU 16CYS 17 -0.1550
CYS 17LYS 18 0.0474
LYS 18CGU 19 -0.1455
CGU 19CGU 20 0.5610
CGU 20GLN 21 0.6047
GLN 21CYS 22 0.0191
CYS 22SER 23 0.1757
SER 23PHE 24 -0.1498
PHE 24CGU 25 0.0008
CGU 25CGU 26 0.0858
CGU 26ALA 27 0.1358
ALA 27ARG 28 -0.0794
ARG 28CGU 29 -0.0175
CGU 29ILE 30 0.0920
ILE 30PHE 31 -0.0543
PHE 31LYS 32 -0.0217
LYS 32ASP 33 -0.1970
ASP 33ALA 34 0.0664
ALA 34CGU 35 -0.3857
CGU 35ARG 36 0.1760
ARG 36THR 37 0.0256
THR 37LYS 38 -0.0709
LYS 38LEU 39 -0.3026
LEU 39PHE 40 0.3346
PHE 40TRP 41 -0.0314
TRP 41ILE 42 -0.1650
ILE 42SER 43 -0.2475
SER 43TYR 44 0.8040
TYR 44SER 45 -0.7966
SER 45ASP 46 -0.6301
ASP 46GLY 47 -0.0429
GLY 47ASP 48 -0.1753
ASP 48GLN 49 0.0691
GLN 49CYS 50 -0.2126
CYS 50ALA 51 0.7758
ALA 51SER 52 -0.4054

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.