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***  fvii  ***

CA strain for 22081221180863076

---  normal mode 27  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ASN 2 0.3027
ASN 2ALA 3 0.1660
ALA 3PHE 4 -0.1607
PHE 4LEU 5 -0.0391
LEU 5CGU 6 -0.1652
CGU 6CGU 7 -0.1136
CGU 7LEU 8 0.3795
LEU 8ARG 9 -0.5460
ARG 9PRO 10 0.0986
PRO 10GLY 11 0.4410
GLY 11SER 12 -0.6943
SER 12LEU 13 0.3169
LEU 13CGU 14 -0.2784
CGU 14ARG 15 0.0486
ARG 15CGU 16 0.0506
CGU 16CYS 17 -0.1049
CYS 17LYS 18 0.2055
LYS 18CGU 19 0.0976
CGU 19CGU 20 0.4551
CGU 20GLN 21 0.2541
GLN 21CYS 22 0.2317
CYS 22SER 23 0.1172
SER 23PHE 24 0.8490
PHE 24CGU 25 -0.2720
CGU 25CGU 26 -0.1013
CGU 26ALA 27 0.1843
ALA 27ARG 28 -0.0328
ARG 28CGU 29 -0.0993
CGU 29ILE 30 -0.0885
ILE 30PHE 31 0.1308
PHE 31LYS 32 -0.2320
LYS 32ASP 33 -0.1592
ASP 33ALA 34 -0.0179
ALA 34CGU 35 0.1366
CGU 35ARG 36 -0.0015
ARG 36THR 37 0.0837
THR 37LYS 38 0.0279
LYS 38LEU 39 -0.2160
LEU 39PHE 40 0.4007
PHE 40TRP 41 -0.0907
TRP 41ILE 42 -0.1325
ILE 42SER 43 0.0654
SER 43TYR 44 -0.2767
TYR 44SER 45 0.3268
SER 45ASP 46 -0.3304
ASP 46GLY 47 0.3789
GLY 47ASP 48 0.4576
ASP 48GLN 49 0.2069
GLN 49CYS 50 -0.2346
CYS 50ALA 51 0.4386
ALA 51SER 52 -0.1714

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.