CNRS Nantes University UFIP UFIP
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***  fvii  ***

CA strain for 22081221180863076

---  normal mode 22  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ASN 2 -0.1022
ASN 2ALA 3 -1.0071
ALA 3PHE 4 -0.4585
PHE 4LEU 5 0.0605
LEU 5CGU 6 -0.1814
CGU 6CGU 7 -0.1815
CGU 7LEU 8 0.0477
LEU 8ARG 9 0.1546
ARG 9PRO 10 0.1668
PRO 10GLY 11 0.2068
GLY 11SER 12 0.1180
SER 12LEU 13 -0.2301
LEU 13CGU 14 0.0360
CGU 14ARG 15 -0.0653
ARG 15CGU 16 0.0752
CGU 16CYS 17 -0.2603
CYS 17LYS 18 0.0910
LYS 18CGU 19 0.0185
CGU 19CGU 20 0.1225
CGU 20GLN 21 -0.1522
GLN 21CYS 22 0.1143
CYS 22SER 23 0.1930
SER 23PHE 24 -0.4147
PHE 24CGU 25 0.0173
CGU 25CGU 26 0.1167
CGU 26ALA 27 -0.7734
ALA 27ARG 28 0.0870
ARG 28CGU 29 0.0556
CGU 29ILE 30 -0.0039
ILE 30PHE 31 -0.6050
PHE 31LYS 32 0.2533
LYS 32ASP 33 -0.1857
ASP 33ALA 34 0.2352
ALA 34CGU 35 -0.4811
CGU 35ARG 36 -0.0730
ARG 36THR 37 -0.1000
THR 37LYS 38 0.1319
LYS 38LEU 39 -0.2120
LEU 39PHE 40 0.0870
PHE 40TRP 41 -0.0905
TRP 41ILE 42 -0.1523
ILE 42SER 43 0.2619
SER 43TYR 44 -0.3890
TYR 44SER 45 -0.0915
SER 45ASP 46 0.2350
ASP 46GLY 47 -0.0372
GLY 47ASP 48 0.2304
ASP 48GLN 49 0.1762
GLN 49CYS 50 -0.3157
CYS 50ALA 51 0.0524
ALA 51SER 52 -0.1025

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.