CNRS Nantes University UFIP UFIP
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***  fvii  ***

CA strain for 22081221180863076

---  normal mode 21  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ASN 2 -0.2881
ASN 2ALA 3 -0.0775
ALA 3PHE 4 0.5082
PHE 4LEU 5 0.0138
LEU 5CGU 6 -0.2945
CGU 6CGU 7 0.1660
CGU 7LEU 8 -0.4739
LEU 8ARG 9 0.0806
ARG 9PRO 10 -0.1940
PRO 10GLY 11 -0.3229
GLY 11SER 12 -0.2026
SER 12LEU 13 0.0600
LEU 13CGU 14 -0.4709
CGU 14ARG 15 0.2358
ARG 15CGU 16 0.1657
CGU 16CYS 17 -0.2631
CYS 17LYS 18 0.0989
LYS 18CGU 19 -0.2933
CGU 19CGU 20 0.2328
CGU 20GLN 21 0.3891
GLN 21CYS 22 0.2653
CYS 22SER 23 0.2537
SER 23PHE 24 -0.0213
PHE 24CGU 25 0.1600
CGU 25CGU 26 -0.0107
CGU 26ALA 27 -0.1947
ALA 27ARG 28 -0.0248
ARG 28CGU 29 -0.0846
CGU 29ILE 30 -0.1392
ILE 30PHE 31 0.0578
PHE 31LYS 32 -0.3812
LYS 32ASP 33 0.2078
ASP 33ALA 34 0.1821
ALA 34CGU 35 0.0016
CGU 35ARG 36 -0.1265
ARG 36THR 37 -0.1379
THR 37LYS 38 0.1064
LYS 38LEU 39 0.5216
LEU 39PHE 40 -0.2943
PHE 40TRP 41 -0.0830
TRP 41ILE 42 0.1673
ILE 42SER 43 0.3177
SER 43TYR 44 -0.1805
TYR 44SER 45 -0.2727
SER 45ASP 46 0.2183
ASP 46GLY 47 0.0422
GLY 47ASP 48 0.0647
ASP 48GLN 49 0.3210
GLN 49CYS 50 -0.1376
CYS 50ALA 51 0.4889
ALA 51SER 52 -0.2167

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.