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***  fvii  ***

CA strain for 22081221180863076

---  normal mode 17  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ASN 2 0.4036
ASN 2ALA 3 -0.1639
ALA 3PHE 4 0.8162
PHE 4LEU 5 -0.0009
LEU 5CGU 6 -0.3278
CGU 6CGU 7 -0.0012
CGU 7LEU 8 0.4219
LEU 8ARG 9 -0.1944
ARG 9PRO 10 -0.1792
PRO 10GLY 11 0.1024
GLY 11SER 12 -0.2092
SER 12LEU 13 0.1610
LEU 13CGU 14 -0.0573
CGU 14ARG 15 0.0917
ARG 15CGU 16 -0.0851
CGU 16CYS 17 0.2206
CYS 17LYS 18 -0.0151
LYS 18CGU 19 0.1722
CGU 19CGU 20 0.1594
CGU 20GLN 21 -0.1769
GLN 21CYS 22 -0.0513
CYS 22SER 23 -0.0348
SER 23PHE 24 0.0743
PHE 24CGU 25 -0.2226
CGU 25CGU 26 -0.1022
CGU 26ALA 27 -0.0159
ALA 27ARG 28 0.0018
ARG 28CGU 29 -0.1701
CGU 29ILE 30 0.0420
ILE 30PHE 31 -0.1949
PHE 31LYS 32 0.0279
LYS 32ASP 33 -0.2790
ASP 33ALA 34 0.0394
ALA 34CGU 35 -0.2872
CGU 35ARG 36 0.0553
ARG 36THR 37 -0.0524
THR 37LYS 38 -0.0088
LYS 38LEU 39 -0.2398
LEU 39PHE 40 0.3908
PHE 40TRP 41 -0.0325
TRP 41ILE 42 -0.1805
ILE 42SER 43 0.0082
SER 43TYR 44 0.2753
TYR 44SER 45 0.2033
SER 45ASP 46 -0.1107
ASP 46GLY 47 -0.1499
GLY 47ASP 48 -0.3947
ASP 48GLN 49 -0.0261
GLN 49CYS 50 -0.0370
CYS 50ALA 51 -0.1281
ALA 51SER 52 -0.0369

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.