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***  fvii  ***

CA strain for 22081221180863076

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ASN 2 0.0685
ASN 2ALA 3 0.0706
ALA 3PHE 4 -0.0755
PHE 4LEU 5 -0.0437
LEU 5CGU 6 -0.1886
CGU 6CGU 7 -0.0024
CGU 7LEU 8 0.0181
LEU 8ARG 9 0.2395
ARG 9PRO 10 -0.0688
PRO 10GLY 11 -0.0020
GLY 11SER 12 0.1227
SER 12LEU 13 -0.0697
LEU 13CGU 14 -0.0206
CGU 14ARG 15 -0.1863
ARG 15CGU 16 0.0059
CGU 16CYS 17 -0.0810
CYS 17LYS 18 0.0457
LYS 18CGU 19 -0.0744
CGU 19CGU 20 0.0077
CGU 20GLN 21 0.0167
GLN 21CYS 22 0.0200
CYS 22SER 23 -0.0149
SER 23PHE 24 0.0530
PHE 24CGU 25 0.1182
CGU 25CGU 26 -0.0006
CGU 26ALA 27 0.2043
ALA 27ARG 28 -0.0453
ARG 28CGU 29 0.1013
CGU 29ILE 30 0.0428
ILE 30PHE 31 -0.0177
PHE 31LYS 32 -0.0214
LYS 32ASP 33 0.0674
ASP 33ALA 34 -0.0124
ALA 34CGU 35 0.0799
CGU 35ARG 36 -0.0511
ARG 36THR 37 0.0622
THR 37LYS 38 0.0134
LYS 38LEU 39 0.0453
LEU 39PHE 40 -0.1294
PHE 40TRP 41 -0.0029
TRP 41ILE 42 0.0440
ILE 42SER 43 0.0192
SER 43TYR 44 -0.0777
TYR 44SER 45 -0.0979
SER 45ASP 46 0.0254
ASP 46GLY 47 0.1041
GLY 47ASP 48 0.1884
ASP 48GLN 49 -0.0066
GLN 49CYS 50 -0.0403
CYS 50ALA 51 -0.0671
ALA 51SER 52 0.0266

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.