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***  proz  ***

CA strain for 22070401545669005

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1GLY 2 -0.2074
GLY 2SER 3 -0.0384
SER 3TYR 4 0.2292
TYR 4LEU 5 -0.0132
LEU 5LEU 6 0.0429
LEU 6CGU 7 -0.2053
CGU 7CGU 8 0.0924
CGU 8LEU 9 0.1988
LEU 9PHE 10 -0.0072
PHE 10CGU 11 0.1141
CGU 11GLY 12 0.0721
GLY 12ASN 13 0.1700
ASN 13LEU 14 -0.2542
LEU 14CGU 15 0.0042
CGU 15LYS 16 -0.0799
LYS 16CGU 17 0.0051
CGU 17CYS 18 -0.2637
CYS 18TYR 19 0.0151
TYR 19CGU 20 -0.0765
CGU 20CGU 21 -0.0006
CGU 21ILE 22 0.0071
ILE 22CYS 23 0.0546
CYS 23VAL 24 0.0125
VAL 24TYR 25 -0.0316
TYR 25CGU 26 0.2444
CGU 26CGU 27 0.0594
CGU 27ALA 28 0.0870
ALA 28ARG 29 -0.0525
ARG 29CGU 30 0.2361
CGU 30VAL 31 -0.0602
VAL 31PHE 32 0.0734
PHE 32CGU 33 -0.0231
CGU 33ASN 34 0.1275
ASN 34CGU 35 -0.0116
CGU 35VAL 36 0.1079
VAL 36VAL 37 -0.0391
VAL 37THR 38 0.0602
THR 38ASP 39 0.0707
ASP 39CGU 40 0.0802
CGU 40PHE 41 -0.2401
PHE 41TRP 42 0.0152
TRP 42ARG 43 0.0553
ARG 43ARG 44 -0.0943
ARG 44TYR 45 -0.0905
TYR 45LYS 46 -0.1097

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.