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***  proz  ***

CA strain for 22070401545669005

---  normal mode 15  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1GLY 2 -0.6852
GLY 2SER 3 -0.0275
SER 3TYR 4 -0.0606
TYR 4LEU 5 -0.5720
LEU 5LEU 6 -0.1450
LEU 6CGU 7 0.0748
CGU 7CGU 8 0.0255
CGU 8LEU 9 -0.2802
LEU 9PHE 10 0.0733
PHE 10CGU 11 0.2285
CGU 11GLY 12 0.0883
GLY 12ASN 13 0.3975
ASN 13LEU 14 -0.1583
LEU 14CGU 15 0.1093
CGU 15LYS 16 0.0233
LYS 16CGU 17 0.1683
CGU 17CYS 18 -0.0842
CYS 18TYR 19 -0.1429
TYR 19CGU 20 0.1945
CGU 20CGU 21 -0.2582
CGU 21ILE 22 0.2998
ILE 22CYS 23 0.0792
CYS 23VAL 24 0.0366
VAL 24TYR 25 0.0736
TYR 25CGU 26 -0.1247
CGU 26CGU 27 0.0748
CGU 27ALA 28 -0.2410
ALA 28ARG 29 0.1860
ARG 29CGU 30 0.0089
CGU 30VAL 31 0.3237
VAL 31PHE 32 -0.4654
PHE 32CGU 33 0.4439
CGU 33ASN 34 -0.1560
ASN 34CGU 35 -0.0342
CGU 35VAL 36 0.1163
VAL 36VAL 37 -0.1820
VAL 37THR 38 0.0101
THR 38ASP 39 -0.1445
ASP 39CGU 40 0.1799
CGU 40PHE 41 -0.3368
PHE 41TRP 42 0.0003
TRP 42ARG 43 -0.0645
ARG 43ARG 44 -0.1214
ARG 44TYR 45 -0.1376
TYR 45LYS 46 -0.0465

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.