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***  proz  ***

CA strain for 22070401545669005

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1GLY 2 -0.2833
GLY 2SER 3 -0.0291
SER 3TYR 4 -0.1606
TYR 4LEU 5 0.2378
LEU 5LEU 6 0.1004
LEU 6CGU 7 -0.1885
CGU 7CGU 8 -0.0929
CGU 8LEU 9 -0.1450
LEU 9PHE 10 0.3252
PHE 10CGU 11 -0.1459
CGU 11GLY 12 -0.1166
GLY 12ASN 13 -0.1295
ASN 13LEU 14 0.2150
LEU 14CGU 15 0.2561
CGU 15LYS 16 -0.0206
LYS 16CGU 17 -0.0510
CGU 17CYS 18 0.0634
CYS 18TYR 19 -0.0387
TYR 19CGU 20 0.2535
CGU 20CGU 21 -0.1547
CGU 21ILE 22 -0.0301
ILE 22CYS 23 0.0287
CYS 23VAL 24 -0.0057
VAL 24TYR 25 -0.5136
TYR 25CGU 26 0.1444
CGU 26CGU 27 -0.1612
CGU 27ALA 28 0.0257
ALA 28ARG 29 0.0087
ARG 29CGU 30 -0.1770
CGU 30VAL 31 0.0973
VAL 31PHE 32 0.3536
PHE 32CGU 33 -0.2462
CGU 33ASN 34 0.0222
ASN 34CGU 35 0.1105
CGU 35VAL 36 -0.1843
VAL 36VAL 37 0.2343
VAL 37THR 38 -0.1321
THR 38ASP 39 0.0870
ASP 39CGU 40 -0.1816
CGU 40PHE 41 0.5715
PHE 41TRP 42 -0.1570
TRP 42ARG 43 -0.0483
ARG 43ARG 44 -0.0134
ARG 44TYR 45 0.5648
TYR 45LYS 46 -0.0801

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.