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***  proz  ***

CA strain for 22070401545669005

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1GLY 2 -0.2636
GLY 2SER 3 0.2214
SER 3TYR 4 -0.3265
TYR 4LEU 5 0.1110
LEU 5LEU 6 -0.0819
LEU 6CGU 7 0.2633
CGU 7CGU 8 0.0517
CGU 8LEU 9 -0.2558
LEU 9PHE 10 0.0045
PHE 10CGU 11 0.0676
CGU 11GLY 12 0.0951
GLY 12ASN 13 0.0810
ASN 13LEU 14 0.0389
LEU 14CGU 15 -0.1529
CGU 15LYS 16 0.0145
LYS 16CGU 17 0.0425
CGU 17CYS 18 -0.0902
CYS 18TYR 19 -0.0117
TYR 19CGU 20 -0.1811
CGU 20CGU 21 0.0532
CGU 21ILE 22 0.1198
ILE 22CYS 23 0.1375
CYS 23VAL 24 0.0172
VAL 24TYR 25 0.0012
TYR 25CGU 26 -0.1042
CGU 26CGU 27 0.0673
CGU 27ALA 28 -0.1187
ALA 28ARG 29 -0.0470
ARG 29CGU 30 0.1545
CGU 30VAL 31 -0.1574
VAL 31PHE 32 0.2196
PHE 32CGU 33 -0.1461
CGU 33ASN 34 0.2180
ASN 34CGU 35 -0.0308
CGU 35VAL 36 0.1348
VAL 36VAL 37 -0.0510
VAL 37THR 38 0.0185
THR 38ASP 39 0.1492
ASP 39CGU 40 0.1004
CGU 40PHE 41 -0.3511
PHE 41TRP 42 -0.0044
TRP 42ARG 43 -0.0119
ARG 43ARG 44 -0.3170
ARG 44TYR 45 -0.1874
TYR 45LYS 46 0.0398

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.