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CA strain for 22031716075569948

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
SER 3LEU 4 -0.0508
LEU 4LEU 5 -0.0888
LEU 5GLU 6 0.1583
GLU 6GLU 7 -0.1497
GLU 7THR 8 0.1101
THR 8LYS 9 -0.1275
LYS 9GLN 10 -0.2561
GLN 10GLY 11 -0.0072
GLY 11ASN 12 0.0406
ASN 12LEU 13 -0.2842
LEU 13GLU 14 0.0672
GLU 14ARG 15 -0.0237
ARG 15GLU 16 -0.0017
GLU 16CYS 17 0.0928
CYS 17ILE 18 -0.0149
ILE 18GLU 19 -0.0050
GLU 19GLU 20 -0.0152
GLU 20LEU 21 0.1118
LEU 21CYS 22 -0.1961
CYS 22ASN 23 -0.0830
ASN 23LYS 24 -0.0105
LYS 24GLU 25 0.1490
GLU 25GLU 26 -0.0033
GLU 26ALA 27 0.0656
ALA 27ARG 28 -0.0277
ARG 28GLU 29 0.0612
GLU 29VAL 30 0.0567
VAL 30PHE 31 -0.1217
PHE 31GLU 32 0.1116
GLU 32ASN 33 -0.0713
ASN 33ASP 34 0.0003
ASP 34PRO 35 0.0362
PRO 35GLU 36 -0.0082
GLU 36THR 37 -0.0217
THR 37ASP 38 0.0351
ASP 38TYR 39 0.1010
TYR 39PHE 40 0.0308
PHE 40TYR 41 -0.0652
TYR 41PRO 42 0.0846
PRO 42LYS 43 0.0931
LYS 43TYR 44 0.0370
TYR 44LEU 45 0.0277
LEU 45VAL 46 0.1196
VAL 46ILE 47 -0.0214
ILE 47PRO 48 0.0581
PRO 48ASP 49 0.0430
ASP 49GLN 50 0.0005
GLN 50CYS 51 -0.0446
CYS 51SER 52 0.0227
SER 52CA 201 -0.1206
CA 201CA 202 -0.0003
CA 202CA 203 0.0003
CA 203CA 204 -0.2433
CA 204CA 205 -0.0005
CA 205CA 206 0.0002

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.