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***  1NL2_1  ***

CA strain for 22031019083093443

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ASN 2 -0.0836
ASN 2LYS 3 0.0972
LYS 3GLY 4 -0.0547
GLY 4PHE 5 0.0730
PHE 5LEU 6 0.0173
LEU 6VAL 9 0.0853
VAL 9ARG 10 0.0964
ARG 10LYS 11 0.0214
LYS 11GLY 12 -0.1044
GLY 12ASN 13 -0.1147
ASN 13LEU 14 0.0944
LEU 14ARG 16 0.0554
ARG 16CYS 18 -0.0369
CYS 18LEU 19 -0.0436
LEU 19PRO 22 -0.0166
PRO 22CYS 23 0.0911
CYS 23SER 24 0.0096
SER 24ARG 25 -0.1052
ARG 25ALA 28 -0.0834
ALA 28PHE 29 0.0366
PHE 29ALA 31 -0.0514
ALA 31LEU 32 0.0734
LEU 32SER 34 0.0415
SER 34LEU 35 0.0574
LEU 35SER 36 -0.0218
SER 36ALA 37 0.1867
ALA 37THR 38 0.0301
THR 38ASP 39 -0.0107
ASP 39ALA 40 -0.1692
ALA 40PHE 41 0.1471
PHE 41TRP 42 -0.0488
TRP 42ALA 43 0.0186
ALA 43LYS 44 0.0232
LYS 44TYR 45 -0.0336
TYR 45THR 46 -0.0532
THR 46ALA 47 0.2949
ALA 47CYS 48 -0.1359
CYS 48GLU 49 0.0137
GLU 49SER 50 0.1007
SER 50ALA 51 0.0012
ALA 51ARG 52 0.0132
ARG 52ASN 53 -0.0084
ASN 53PRO 54 -0.0304
PRO 54ARG 55 -0.0143
ARG 55GLU 56 -0.0288
GLU 56LYS 57 -0.0909
LYS 57LEU 58 -0.0248
LEU 58ASN 59 0.0271
ASN 59GLU 60 -0.1658
GLU 60CYS 61 0.0260
CYS 61LEU 62 -0.0819
LEU 62GLU 63 -0.1084
GLU 63GLY 64 0.0126
GLY 64ASN 65 -0.0998
ASN 65CYS 66 0.0293
CYS 66ALA 67 -0.0659
ALA 67GLU 68 0.2032
GLU 68GLY 69 -0.0990
GLY 69VAL 70 -0.2533
VAL 70GLY 71 0.0289
GLY 71MET 72 0.0043
MET 72ASN 73 -0.0233
ASN 73TYR 74 0.0365
TYR 74ARG 75 0.0293
ARG 75GLY 76 -0.1646
GLY 76ASN 77 0.0502
ASN 77VAL 78 -0.0478
VAL 78SER 79 0.1478
SER 79VAL 80 -0.0603
VAL 80THR 81 -0.0124
THR 81ARG 82 -0.0163
ARG 82SER 83 0.0006
SER 83GLY 84 -0.0072
GLY 84ILE 85 0.0141
ILE 85GLU 86 -0.0252
GLU 86CYS 87 -0.0177
CYS 87GLN 88 0.0561
GLN 88LEU 89 -0.0327
LEU 89TRP 90 -0.0558
TRP 90ARG 91 -0.0116
ARG 91SER 92 -0.0525
SER 92ARG 93 0.0763
ARG 93TYR 94 0.0146
TYR 94PRO 95 -0.0128
PRO 95HIS 96 -0.0042
HIS 96LYS 97 0.0051
LYS 97PRO 98 0.0065
PRO 98GLU 99 0.0022
GLU 99ILE 100 -0.0505
ILE 100ASN 101 -0.0225
ASN 101SER 102 -0.0164
SER 102THR 103 0.0373
THR 103THR 104 -0.0307
THR 104HIS 105 -0.0648
HIS 105PRO 106 0.3019
PRO 106GLY 107 0.0119
GLY 107ALA 108 0.0703
ALA 108ASP 109 -0.0310
ASP 109LEU 110 -0.0573
LEU 110ARG 111 -0.0101
ARG 111GLU 112 -0.0432
GLU 112ASN 113 -0.0375
ASN 113PHE 114 0.0630
PHE 114CYS 115 -0.0089
CYS 115ARG 116 -0.0305
ARG 116ASN 117 0.0318
ASN 117PRO 118 -0.0248
PRO 118ASP 119 0.0735
ASP 119GLY 120 -0.0771
GLY 120SER 121 0.0445
SER 121ILE 122 0.0015
ILE 122THR 123 0.0259
THR 123GLY 124 -0.0275
GLY 124PRO 125 -0.0019
PRO 125TRP 126 -0.0372
TRP 126CYS 127 -0.0142
CYS 127TYR 128 -0.0064
TYR 128THR 129 0.0148
THR 129THR 130 -0.0035
THR 130SER 131 -0.0111
SER 131PRO 132 0.0062
PRO 132THR 133 0.0003
THR 133LEU 134 -0.0122
LEU 134ARG 135 0.0363
ARG 135ARG 136 -0.0188
ARG 136GLU 137 -0.0129
GLU 137GLU 138 -0.0234
GLU 138CYS 139 -0.0394
CYS 139SER 140 0.0175
SER 140VAL 141 -0.0093
VAL 141PRO 142 -0.0047
PRO 142VAL 143 0.0625
VAL 143CYS 144 0.0225
CYS 144GLY 145 -0.0365
GLY 145GLN 146 0.0471

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.