This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ALA 1
ASN 2
-0.0594
ASN 2
LYS 3
0.0264
LYS 3
GLY 4
-0.0248
GLY 4
PHE 5
0.0404
PHE 5
LEU 6
-0.0036
LEU 6
VAL 9
0.0228
VAL 9
ARG 10
0.0617
ARG 10
LYS 11
-0.0064
LYS 11
GLY 12
0.0489
GLY 12
ASN 13
0.0438
ASN 13
LEU 14
0.0496
LEU 14
ARG 16
-0.0704
ARG 16
CYS 18
0.0174
CYS 18
LEU 19
-0.0465
LEU 19
PRO 22
-0.0190
PRO 22
CYS 23
0.1241
CYS 23
SER 24
-0.0759
SER 24
ARG 25
0.2131
ARG 25
ALA 28
-0.0239
ALA 28
PHE 29
0.0261
PHE 29
ALA 31
-0.0205
ALA 31
LEU 32
0.0858
LEU 32
SER 34
0.0254
SER 34
LEU 35
0.0194
LEU 35
SER 36
-0.0038
SER 36
ALA 37
-0.0106
ALA 37
THR 38
-0.0167
THR 38
ASP 39
0.0485
ASP 39
ALA 40
0.0279
ALA 40
PHE 41
-0.0187
PHE 41
TRP 42
0.0197
TRP 42
ALA 43
0.0670
ALA 43
LYS 44
0.0182
LYS 44
TYR 45
-0.0248
TYR 45
THR 46
0.0048
THR 46
ALA 47
-0.0050
ALA 47
CYS 48
0.0228
CYS 48
GLU 49
-0.0062
GLU 49
SER 50
-0.0178
SER 50
ALA 51
0.0113
ALA 51
ARG 52
-0.0526
ARG 52
ASN 53
-0.0313
ASN 53
PRO 54
0.0031
PRO 54
ARG 55
0.0109
ARG 55
GLU 56
-0.0037
GLU 56
LYS 57
0.0099
LYS 57
LEU 58
-0.0067
LEU 58
ASN 59
-0.0037
ASN 59
GLU 60
-0.0311
GLU 60
CYS 61
0.0163
CYS 61
LEU 62
0.0029
LEU 62
GLU 63
-0.0174
GLU 63
GLY 64
-0.0053
GLY 64
ASN 65
0.0113
ASN 65
CYS 66
0.0133
CYS 66
ALA 67
0.0026
ALA 67
GLU 68
-0.0257
GLU 68
GLY 69
0.0062
GLY 69
VAL 70
0.0080
VAL 70
GLY 71
-0.0002
GLY 71
MET 72
0.0028
MET 72
ASN 73
0.0058
ASN 73
TYR 74
-0.0020
TYR 74
ARG 75
-0.0022
ARG 75
GLY 76
0.0188
GLY 76
ASN 77
-0.0130
ASN 77
VAL 78
0.0047
VAL 78
SER 79
-0.0251
SER 79
VAL 80
0.0086
VAL 80
THR 81
0.0033
THR 81
ARG 82
0.0049
ARG 82
SER 83
-0.0098
SER 83
GLY 84
0.0035
GLY 84
ILE 85
-0.0006
ILE 85
GLU 86
0.0052
GLU 86
CYS 87
0.0049
CYS 87
GLN 88
-0.0115
GLN 88
LEU 89
0.0060
LEU 89
TRP 90
0.0094
TRP 90
ARG 91
-0.0039
ARG 91
SER 92
0.0155
SER 92
ARG 93
-0.0039
ARG 93
TYR 94
0.0023
TYR 94
PRO 95
-0.0023
PRO 95
HIS 96
0.0033
HIS 96
LYS 97
0.0020
LYS 97
PRO 98
0.0103
PRO 98
GLU 99
-0.0071
GLU 99
ILE 100
0.0024
ILE 100
ASN 101
0.0011
ASN 101
SER 102
0.0148
SER 102
THR 103
-0.0136
THR 103
THR 104
-0.0018
THR 104
HIS 105
0.0041
HIS 105
PRO 106
0.0047
PRO 106
GLY 107
-0.0060
GLY 107
ALA 108
0.0198
ALA 108
ASP 109
0.0007
ASP 109
LEU 110
0.0165
LEU 110
ARG 111
-0.0036
ARG 111
GLU 112
0.0077
GLU 112
ASN 113
0.0062
ASN 113
PHE 114
-0.0100
PHE 114
CYS 115
0.0022
CYS 115
ARG 116
0.0094
ARG 116
ASN 117
-0.0037
ASN 117
PRO 118
-0.0034
PRO 118
ASP 119
-0.0073
ASP 119
GLY 120
0.0025
GLY 120
SER 121
0.0015
SER 121
ILE 122
-0.0031
ILE 122
THR 123
0.0003
THR 123
GLY 124
-0.0012
GLY 124
PRO 125
0.0014
PRO 125
TRP 126
-0.0088
TRP 126
CYS 127
-0.0004
CYS 127
TYR 128
-0.0055
TYR 128
THR 129
0.0056
THR 129
THR 130
0.0010
THR 130
SER 131
0.0011
SER 131
PRO 132
-0.0055
PRO 132
THR 133
0.0015
THR 133
LEU 134
-0.0025
LEU 134
ARG 135
0.0030
ARG 135
ARG 136
-0.0002
ARG 136
GLU 137
-0.0013
GLU 137
GLU 138
-0.0043
GLU 138
CYS 139
-0.0028
CYS 139
SER 140
0.0024
SER 140
VAL 141
-0.0342
VAL 141
PRO 142
-0.0104
PRO 142
VAL 143
-0.0018
VAL 143
CYS 144
-0.0182
CYS 144
GLY 145
0.0116
GLY 145
GLN 146
-0.0202
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.