This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PRO 2
SER 3
0.0948
SER 3
GLU 4
-0.0138
GLU 4
LEU 5
-0.0227
LEU 5
THR 6
0.1429
THR 6
PRO 7
-0.0603
PRO 7
GLU 8
0.0185
GLU 8
GLU 9
0.0114
GLU 9
ARG 10
-0.0214
ARG 10
SER 11
-0.0558
SER 11
GLU 12
-0.0374
GLU 12
LEU 13
0.0803
LEU 13
LYS 14
-0.0477
LYS 14
ASN 15
0.0152
ASN 15
SER 16
0.0459
SER 16
ILE 17
0.0197
ILE 17
ALA 18
-0.0474
ALA 18
GLU 19
0.0857
GLU 19
PHE 20
0.0339
PHE 20
HIS 21
-0.1037
HIS 21
THR 22
-0.0091
THR 22
TYR 23
0.1803
TYR 23
GLN 24
-0.0643
GLN 24
LEU 25
-0.0293
LEU 25
ASP 26
-0.1044
ASP 26
PRO 27
0.0559
PRO 27
GLY 28
-0.0497
GLY 28
SER 29
0.0047
SER 29
CYS 30
0.0507
CYS 30
SER 31
0.1131
SER 31
SER 32
0.1975
SER 32
LEU 33
0.1872
LEU 33
HIS 34
0.0603
HIS 34
ALA 35
0.3654
ALA 35
GLN 36
0.1202
GLN 36
ARG 37
0.2029
ARG 37
ILE 38
-0.1338
ILE 38
HIS 39
0.1270
HIS 39
ALA 40
-0.1201
ALA 40
PRO 41
0.0890
PRO 41
PRO 42
0.0214
PRO 42
GLU 43
-0.0026
GLU 43
LEU 44
0.0669
LEU 44
VAL 45
0.0892
VAL 45
TRP 46
0.0073
TRP 46
SER 47
0.0672
SER 47
ILE 48
-0.0130
ILE 48
VAL 49
0.0533
VAL 49
ARG 50
0.0435
ARG 50
ARG 51
0.0199
ARG 51
PHE 52
-0.1307
PHE 52
ASP 53
-0.0023
ASP 53
LYS 54
0.0417
LYS 54
PRO 55
0.0435
PRO 55
GLN 56
-0.0100
GLN 56
THR 57
-0.1075
THR 57
TYR 58
0.0478
TYR 58
LYS 59
-0.0512
LYS 59
HIS 60
-0.0307
HIS 60
PHE 61
-0.0398
PHE 61
ILE 62
0.0575
ILE 62
LYS 63
-0.0194
LYS 63
SER 64
0.0517
SER 64
CYS 65
0.0555
CYS 65
SER 66
0.0520
SER 66
VAL 67
0.0992
VAL 67
GLU 68
0.0069
GLU 68
GLN 69
0.0274
GLN 69
ASN 70
-0.0008
ASN 70
ASN 70
0.0005
ASN 70
PHE 71
-0.0195
PHE 71
PHE 71
0.0027
PHE 71
GLU 72
0.0088
GLU 72
MET 73
-0.0466
MET 73
MET 73
-0.0011
MET 73
ARG 74
-0.0118
ARG 74
VAL 75
-0.0276
VAL 75
GLY 76
-0.0035
GLY 76
CYS 77
-0.0034
CYS 77
THR 78
0.0233
THR 78
ARG 79
0.0313
ARG 79
ASP 80
0.0268
ASP 80
VAL 81
0.0249
VAL 81
ILE 82
0.0153
ILE 82
VAL 83
0.0416
VAL 83
ILE 84
-0.0072
ILE 84
SER 85
-0.0032
SER 85
GLY 86
0.0024
GLY 86
LEU 87
0.0113
LEU 87
PRO 88
-0.0436
PRO 88
ALA 89
0.0150
ALA 89
ASN 90
0.0169
ASN 90
THR 91
0.0249
THR 91
SER 92
0.0196
SER 92
THR 93
0.0109
THR 93
GLU 94
0.0346
GLU 94
ARG 95
0.0330
ARG 95
LEU 96
-0.0410
LEU 96
ASP 97
0.0142
ASP 97
ILE 98
-0.0275
ILE 98
LEU 99
-0.0356
LEU 99
ASP 100
-0.0047
ASP 100
ASP 101
0.0015
ASP 101
GLU 102
0.0067
GLU 102
ARG 103
-0.0319
ARG 103
ARG 104
0.0216
ARG 104
VAL 105
-0.1294
VAL 105
THR 106
-0.0063
THR 106
GLY 107
-0.0701
GLY 107
PHE 108
-0.0236
PHE 108
SER 109
-0.0049
SER 109
ILE 110
0.0011
ILE 110
ILE 111
0.0899
ILE 111
GLY 112
-0.0196
GLY 112
GLY 113
0.0210
GLY 113
GLU 114
0.0193
GLU 114
HIS 115
0.0040
HIS 115
ARG 116
-0.0599
ARG 116
LEU 117
0.0268
LEU 117
THR 118
0.0433
THR 118
ASN 119
-0.0121
ASN 119
TYR 120
0.0733
TYR 120
LYS 121
0.0231
LYS 121
SER 122
-0.0221
SER 122
VAL 123
0.0651
VAL 123
THR 124
-0.0689
THR 124
THR 125
-0.0243
THR 125
VAL 126
-0.0126
VAL 126
HIS 127
-0.0935
HIS 127
ARG 128
-0.0825
ARG 128
PHE 129
-0.0633
PHE 129
GLU 130
-0.0649
GLU 130
LYS 131
-0.0947
LYS 131
GLU 132
0.1152
GLU 132
ASN 133
0.0638
ASN 133
ARG 134
-0.0088
ARG 134
ILE 135
-0.1838
ILE 135
TRP 136
0.0915
TRP 136
THR 137
-0.0023
THR 137
VAL 138
0.0259
VAL 138
VAL 139
0.0735
VAL 139
LEU 140
0.0164
LEU 140
GLU 141
0.0718
GLU 141
SER 142
0.0185
SER 142
TYR 143
0.0593
TYR 143
VAL 144
0.0271
VAL 144
VAL 145
0.0113
VAL 145
ASP 146
0.0202
ASP 146
MET 147
-0.0950
MET 147
PRO 148
0.0278
PRO 148
GLU 149
-0.0465
GLU 149
GLY 150
0.0122
GLY 150
ASN 151
-0.0097
ASN 151
SER 152
-0.0343
SER 152
GLU 153
0.0113
GLU 153
ASP 154
-0.0239
ASP 154
ASP 155
-0.0260
ASP 155
THR 156
-0.0862
THR 156
ARG 157
0.0057
ARG 157
ARG 157
0.0081
ARG 157
MET 158
-0.0426
MET 158
PHE 159
-0.0122
PHE 159
ALA 160
-0.0343
ALA 160
ASP 161
0.0252
ASP 161
THR 162
-0.0705
THR 162
VAL 163
0.0028
VAL 163
VAL 164
-0.0136
VAL 164
LYS 165
-0.0538
LYS 165
LYS 165
-0.0102
LYS 165
LEU 166
-0.0206
LEU 166
ASN 167
0.0171
ASN 167
LEU 168
0.0209
LEU 168
GLN 169
-0.0646
GLN 169
GLN 169
-0.0065
GLN 169
LYS 170
-0.0191
LYS 170
LEU 171
-0.0076
LEU 171
ALA 172
0.0004
ALA 172
THR 173
-0.0370
THR 173
THR 173
0.0073
THR 173
VAL 174
0.0010
VAL 174
ALA 175
-0.0616
ALA 175
GLU 176
-0.0010
GLU 176
ALA 177
-0.0095
ALA 177
MET 178
-0.0111
MET 178
ALA 179
-0.0513
ALA 179
ARG 180
0.0016
ARG 180
ASN 181
-0.0998
ASN 181
SER 182
-0.0684
SER 182
GLY 183
-0.0020
GLY 183
ASP 184
-0.0516
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.