This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
ALA 2
0.0001
ALA 2
TRP 3
-0.0002
TRP 3
MET 4
-0.0001
MET 4
LEU 5
-0.0002
LEU 5
LEU 6
-0.0003
LEU 6
LEU 7
-0.0003
LEU 7
ILE 8
-0.0005
ILE 8
LEU 9
-0.0000
LEU 9
ILE 10
-0.0001
ILE 10
MET 11
0.0001
MET 11
VAL 12
-0.0000
VAL 12
HIS 13
0.0003
HIS 13
PRO 14
0.0003
PRO 14
GLY 15
-0.0003
GLY 15
SER 16
-0.0002
SER 16
CYS 17
-0.0004
CYS 17
ALA 18
-0.0000
ALA 18
LEU 19
-0.0000
LEU 19
TRP 20
-0.0001
TRP 20
VAL 21
0.0000
VAL 21
SER 22
0.0003
SER 22
GLN 23
-0.0002
GLN 23
PRO 24
-0.0000
PRO 24
PRO 25
0.0001
PRO 25
GLU 26
-0.0002
GLU 26
ILE 27
0.0001
ILE 27
ARG 28
-0.0002
ARG 28
THR 29
0.0002
THR 29
LEU 30
-0.0001
LEU 30
GLU 31
-0.0004
GLU 31
GLY 32
0.0002
GLY 32
SER 33
0.0003
SER 33
SER 34
-0.0001
SER 34
ALA 35
-0.0003
ALA 35
PHE 36
0.0000
PHE 36
LEU 37
0.0002
LEU 37
PRO 38
-0.0003
PRO 38
CYS 39
-0.0000
CYS 39
SER 40
-0.0002
SER 40
PHE 41
0.0002
PHE 41
ASN 42
0.0004
ASN 42
ALA 43
-0.0000
ALA 43
SER 44
0.0002
SER 44
GLN 45
-0.0000
GLN 45
GLY 46
0.0004
GLY 46
ARG 47
0.0003
ARG 47
LEU 48
0.0001
LEU 48
ALA 49
-0.0001
ALA 49
ILE 50
-0.0002
ILE 50
GLY 51
0.0001
GLY 51
SER 52
0.0001
SER 52
VAL 53
0.0001
VAL 53
THR 54
-0.0001
THR 54
TRP 55
-0.0001
TRP 55
PHE 56
0.0003
PHE 56
ARG 57
0.0002
ARG 57
ASP 58
0.0002
ASP 58
GLU 59
0.0001
GLU 59
VAL 60
-0.0001
VAL 60
VAL 61
0.0002
VAL 61
PRO 62
0.0000
PRO 62
GLY 63
0.0002
GLY 63
LYS 64
-0.0001
LYS 64
GLU 65
-0.0001
GLU 65
VAL 66
-0.0004
VAL 66
ARG 67
0.0002
ARG 67
ASN 68
0.0000
ASN 68
GLY 69
-0.0001
GLY 69
THR 70
-0.0001
THR 70
PRO 71
-0.0003
PRO 71
GLU 72
-0.0000
GLU 72
PHE 73
-0.0002
PHE 73
ARG 74
0.0001
ARG 74
GLY 75
-0.0002
GLY 75
ARG 76
-0.0002
ARG 76
LEU 77
-0.0001
LEU 77
ALA 78
0.0000
ALA 78
PRO 79
0.0003
PRO 79
LEU 80
-0.0001
LEU 80
ALA 81
0.0001
ALA 81
SER 82
-0.0001
SER 82
SER 83
0.0000
SER 83
ARG 84
0.0002
ARG 84
PHE 85
-0.0003
PHE 85
LEU 86
0.0000
LEU 86
HIS 87
-0.0004
HIS 87
ASP 88
0.0003
ASP 88
HIS 89
0.0000
HIS 89
GLN 90
-0.0004
GLN 90
ALA 91
0.0002
ALA 91
GLU 92
-0.0001
GLU 92
LEU 93
0.0001
LEU 93
HIS 94
0.0002
HIS 94
ILE 95
0.0003
ILE 95
ARG 96
-0.0003
ARG 96
ASP 97
0.0004
ASP 97
VAL 98
0.0002
VAL 98
ARG 99
-0.0003
ARG 99
GLY 100
0.0003
GLY 100
HIS 101
0.0000
HIS 101
ASP 102
-0.0003
ASP 102
ALA 103
-0.0000
ALA 103
SER 104
0.0003
SER 104
ILE 105
-0.0001
ILE 105
TYR 106
0.0001
TYR 106
VAL 107
-0.0001
VAL 107
CYS 108
-0.0001
CYS 108
ARG 109
0.0003
ARG 109
VAL 110
-0.0001
VAL 110
GLU 111
0.0001
GLU 111
VAL 112
0.0001
VAL 112
LEU 113
-0.0001
LEU 113
GLY 114
0.0001
GLY 114
LEU 115
-0.0003
LEU 115
GLY 116
-0.0000
GLY 116
VAL 117
-0.0000
VAL 117
GLY 118
0.0002
GLY 118
THR 119
0.0002
THR 119
GLY 120
-0.0003
GLY 120
ASN 121
-0.0001
ASN 121
GLY 122
-0.0000
GLY 122
THR 123
-0.0001
THR 123
ARG 124
0.0000
ARG 124
LEU 125
0.0001
LEU 125
VAL 126
0.0001
VAL 126
VAL 127
0.0001
VAL 127
GLU 128
0.0001
GLU 128
LYS 129
0.0000
LYS 129
GLU 130
0.0004
GLU 130
HIS 131
-0.0003
HIS 131
PRO 132
0.0003
PRO 132
GLN 133
0.0008
GLN 133
LEU 134
0.0001
LEU 134
GLY 135
0.0006
GLY 135
ALA 136
-0.0002
ALA 136
GLY 137
0.0003
GLY 137
THR 138
0.0002
THR 138
VAL 139
0.0008
VAL 139
LEU 140
-0.0001
LEU 140
LEU 141
-0.0009
LEU 141
LEU 142
-0.0003
LEU 142
ARG 143
0.0008
ARG 143
ALA 144
0.0001
ALA 144
GLY 145
-0.0006
GLY 145
PHE 146
-0.0002
PHE 146
TYR 147
0.0005
TYR 147
ALA 148
-0.0003
ALA 148
VAL 149
0.0002
VAL 149
SER 150
0.0001
SER 150
PHE 151
-0.0004
PHE 151
LEU 152
-0.0002
LEU 152
SER 153
0.0003
SER 153
VAL 154
0.0002
VAL 154
ALA 155
-0.0005
ALA 155
VAL 156
0.0003
VAL 156
GLY 157
-0.0003
GLY 157
SER 158
0.0003
SER 158
THR 159
-0.0013
THR 159
VAL 160
-0.0001
VAL 160
TYR 161
0.0002
TYR 161
TYR 162
-0.0003
TYR 162
GLN 163
-0.0009
GLN 163
GLY 164
0.0000
GLY 164
LYS 165
0.0013
LYS 165
CYS 166
0.0000
CYS 166
LEU 167
0.0006
LEU 167
THR 168
0.0001
THR 168
TRP 169
0.0003
TRP 169
LYS 170
-0.0002
LYS 170
GLY 171
0.0043
GLY 171
PRO 172
0.0000
PRO 172
ARG 173
-0.0095
ARG 173
ARG 174
0.0001
ARG 174
GLN 175
-0.0025
GLN 175
LEU 176
-0.0004
LEU 176
PRO 177
-0.0031
PRO 177
ALA 178
0.0003
ALA 178
VAL 179
-0.0018
VAL 179
VAL 180
0.0000
VAL 180
PRO 181
0.0034
PRO 181
ALA 182
-0.0000
ALA 182
PRO 183
-0.0014
PRO 183
LEU 184
-0.0001
LEU 184
PRO 185
-0.0005
PRO 185
PRO 186
0.0003
PRO 186
PRO 187
0.0029
PRO 187
CYS 188
0.0002
CYS 188
GLY 189
-0.0023
GLY 189
SER 190
-0.0002
SER 190
SER 191
-0.0013
SER 191
ALA 192
-0.0002
ALA 192
HIS 193
0.0007
HIS 193
LEU 194
0.0000
LEU 194
LEU 195
0.0009
LEU 195
PRO 196
0.0003
PRO 196
PRO 197
-0.0000
PRO 197
VAL 198
-0.0002
VAL 198
PRO 199
-0.0002
PRO 199
GLY 200
0.0018
GLY 200
GLY 201
0.0017
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.