This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
ALA 2
0.0001
ALA 2
TRP 3
0.0000
TRP 3
MET 4
0.0002
MET 4
LEU 5
-0.0002
LEU 5
LEU 6
-0.0002
LEU 6
LEU 7
0.0001
LEU 7
ILE 8
0.0001
ILE 8
LEU 9
0.0001
LEU 9
ILE 10
0.0002
ILE 10
MET 11
-0.0004
MET 11
VAL 12
-0.0001
VAL 12
HIS 13
-0.0002
HIS 13
PRO 14
-0.0002
PRO 14
GLY 15
-0.0177
GLY 15
SER 16
0.0001
SER 16
CYS 17
-0.0053
CYS 17
ALA 18
0.0001
ALA 18
LEU 19
-0.0057
LEU 19
TRP 20
0.0002
TRP 20
VAL 21
-0.0015
VAL 21
SER 22
0.0002
SER 22
GLN 23
-0.0004
GLN 23
PRO 24
-0.0002
PRO 24
PRO 25
-0.0004
PRO 25
GLU 26
0.0001
GLU 26
ILE 27
0.0002
ILE 27
ARG 28
-0.0001
ARG 28
THR 29
0.0020
THR 29
LEU 30
0.0002
LEU 30
GLU 31
-0.0029
GLU 31
GLY 32
0.0004
GLY 32
SER 33
0.0016
SER 33
SER 34
-0.0001
SER 34
ALA 35
0.0000
ALA 35
PHE 36
-0.0001
PHE 36
LEU 37
0.0001
LEU 37
PRO 38
0.0002
PRO 38
CYS 39
0.0003
CYS 39
SER 40
-0.0001
SER 40
PHE 41
0.0009
PHE 41
ASN 42
-0.0001
ASN 42
ALA 43
-0.0005
ALA 43
SER 44
0.0001
SER 44
GLN 45
0.0001
GLN 45
GLY 46
0.0003
GLY 46
ARG 47
-0.0001
ARG 47
LEU 48
0.0004
LEU 48
ALA 49
-0.0003
ALA 49
ILE 50
0.0000
ILE 50
GLY 51
-0.0003
GLY 51
SER 52
-0.0003
SER 52
VAL 53
0.0006
VAL 53
THR 54
-0.0002
THR 54
TRP 55
0.0001
TRP 55
PHE 56
-0.0001
PHE 56
ARG 57
-0.0007
ARG 57
ASP 58
0.0002
ASP 58
GLU 59
-0.0008
GLU 59
VAL 60
0.0005
VAL 60
VAL 61
-0.0001
VAL 61
PRO 62
-0.0000
PRO 62
GLY 63
0.0004
GLY 63
LYS 64
-0.0001
LYS 64
GLU 65
0.0000
GLU 65
VAL 66
0.0002
VAL 66
ARG 67
-0.0003
ARG 67
ASN 68
-0.0001
ASN 68
GLY 69
0.0000
GLY 69
THR 70
0.0002
THR 70
PRO 71
-0.0003
PRO 71
GLU 72
-0.0002
GLU 72
PHE 73
0.0002
PHE 73
ARG 74
0.0001
ARG 74
GLY 75
-0.0003
GLY 75
ARG 76
-0.0001
ARG 76
LEU 77
0.0001
LEU 77
ALA 78
-0.0000
ALA 78
PRO 79
0.0001
PRO 79
LEU 80
0.0000
LEU 80
ALA 81
-0.0003
ALA 81
SER 82
0.0001
SER 82
SER 83
0.0004
SER 83
ARG 84
0.0002
ARG 84
PHE 85
0.0000
PHE 85
LEU 86
-0.0003
LEU 86
HIS 87
-0.0004
HIS 87
ASP 88
0.0004
ASP 88
HIS 89
-0.0003
HIS 89
GLN 90
-0.0002
GLN 90
ALA 91
0.0003
ALA 91
GLU 92
0.0001
GLU 92
LEU 93
0.0004
LEU 93
HIS 94
0.0001
HIS 94
ILE 95
0.0001
ILE 95
ARG 96
0.0000
ARG 96
ASP 97
0.0007
ASP 97
VAL 98
0.0000
VAL 98
ARG 99
0.0003
ARG 99
GLY 100
-0.0003
GLY 100
HIS 101
-0.0027
HIS 101
ASP 102
-0.0001
ASP 102
ALA 103
0.0005
ALA 103
SER 104
-0.0001
SER 104
ILE 105
-0.0011
ILE 105
TYR 106
0.0002
TYR 106
VAL 107
-0.0008
VAL 107
CYS 108
-0.0002
CYS 108
ARG 109
-0.0002
ARG 109
VAL 110
0.0002
VAL 110
GLU 111
0.0003
GLU 111
VAL 112
0.0002
VAL 112
LEU 113
-0.0004
LEU 113
GLY 114
-0.0000
GLY 114
LEU 115
-0.0002
LEU 115
GLY 116
-0.0001
GLY 116
VAL 117
-0.0002
VAL 117
GLY 118
0.0001
GLY 118
THR 119
-0.0012
THR 119
GLY 120
0.0000
GLY 120
ASN 121
-0.0003
ASN 121
GLY 122
-0.0001
GLY 122
THR 123
-0.0002
THR 123
ARG 124
-0.0001
ARG 124
LEU 125
-0.0001
LEU 125
VAL 126
-0.0001
VAL 126
VAL 127
-0.0019
VAL 127
GLU 128
0.0001
GLU 128
LYS 129
-0.0051
LYS 129
GLU 130
-0.0003
GLU 130
HIS 131
-0.0115
HIS 131
PRO 132
0.0000
PRO 132
GLN 133
-0.0054
GLN 133
LEU 134
0.0002
LEU 134
GLY 135
-0.0009
GLY 135
ALA 136
-0.0001
ALA 136
GLY 137
0.0055
GLY 137
THR 138
0.0001
THR 138
VAL 139
0.0042
VAL 139
LEU 140
0.0002
LEU 140
LEU 141
-0.0016
LEU 141
LEU 142
-0.0003
LEU 142
ARG 143
0.0039
ARG 143
ALA 144
0.0001
ALA 144
GLY 145
0.0002
GLY 145
PHE 146
-0.0003
PHE 146
TYR 147
-0.0031
TYR 147
ALA 148
-0.0001
ALA 148
VAL 149
0.0047
VAL 149
SER 150
-0.0004
SER 150
PHE 151
-0.0023
PHE 151
LEU 152
0.0006
LEU 152
SER 153
0.0061
SER 153
VAL 154
0.0000
VAL 154
ALA 155
-0.0008
ALA 155
VAL 156
-0.0002
VAL 156
GLY 157
0.0061
GLY 157
SER 158
0.0001
SER 158
THR 159
-0.0004
THR 159
VAL 160
-0.0004
VAL 160
TYR 161
0.0028
TYR 161
TYR 162
0.0001
TYR 162
GLN 163
-0.0006
GLN 163
GLY 164
-0.0001
GLY 164
LYS 165
0.0030
LYS 165
CYS 166
0.0003
CYS 166
LEU 167
0.0026
LEU 167
THR 168
-0.0003
THR 168
TRP 169
-0.0019
TRP 169
LYS 170
0.0003
LYS 170
GLY 171
0.0074
GLY 171
PRO 172
0.0003
PRO 172
ARG 173
-0.0005
ARG 173
ARG 174
-0.0003
ARG 174
GLN 175
0.0028
GLN 175
LEU 176
0.0004
LEU 176
PRO 177
0.0019
PRO 177
ALA 178
-0.0002
ALA 178
VAL 179
-0.0027
VAL 179
VAL 180
0.0003
VAL 180
PRO 181
-0.0018
PRO 181
ALA 182
0.0001
ALA 182
PRO 183
0.0044
PRO 183
LEU 184
-0.0002
LEU 184
PRO 185
-0.0089
PRO 185
PRO 186
-0.0001
PRO 186
PRO 187
0.0138
PRO 187
CYS 188
-0.0002
CYS 188
GLY 189
0.0191
GLY 189
SER 190
-0.0001
SER 190
SER 191
0.0047
SER 191
ALA 192
0.0001
ALA 192
HIS 193
0.0084
HIS 193
LEU 194
-0.0000
LEU 194
LEU 195
-0.0010
LEU 195
PRO 196
-0.0001
PRO 196
PRO 197
0.0003
PRO 197
VAL 198
0.0001
VAL 198
PRO 199
-0.0009
PRO 199
GLY 200
0.0000
GLY 200
GLY 201
0.0009
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.