This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
CYS 1
CYS 1
-0.0035
CYS 1
ASP 2
-0.0053
ASP 2
ALA 3
0.1288
ALA 3
PHE 4
-0.0150
PHE 4
VAL 5
0.1379
VAL 5
GLY 6
-0.0005
GLY 6
THR 7
0.0387
THR 7
TRP 8
0.0665
TRP 8
LYS 9
-0.0283
LYS 9
LEU 10
0.0289
LEU 10
VAL 11
0.0351
VAL 11
SER 12
0.1789
SER 12
SER 13
0.1501
SER 13
GLU 14
0.0668
GLU 14
GLU 14
-0.0079
GLU 14
ASN 15
0.0631
ASN 15
ASN 15
0.0001
ASN 15
PHE 16
-0.0529
PHE 16
ASP 17
0.1005
ASP 17
ASP 18
-0.0823
ASP 18
ASP 18
-0.0075
ASP 18
TYR 19
-0.0540
TYR 19
MET 20
0.0542
MET 20
LYS 21
-0.0213
LYS 21
GLU 22
-0.1882
GLU 22
VAL 23
-0.0711
VAL 23
GLY 24
0.0770
GLY 24
VAL 25
-0.1184
VAL 25
GLY 26
0.1149
GLY 26
PHE 27
0.0856
PHE 27
ALA 28
-0.0357
ALA 28
THR 29
0.1291
THR 29
ARG 30
0.0401
ARG 30
LYS 31
-0.0217
LYS 31
VAL 32
-0.0551
VAL 32
VAL 32
0.0099
VAL 32
ALA 33
0.0495
ALA 33
GLY 34
-0.0066
GLY 34
MET 35
-0.0915
MET 35
ALA 36
0.0065
ALA 36
LYS 37
-0.1750
LYS 37
PRO 38
0.0903
PRO 38
ASN 39
-0.0416
ASN 39
MET 40
0.0632
MET 40
ILE 41
0.1534
ILE 41
ILE 42
-0.0809
ILE 42
SER 43
0.1670
SER 43
VAL 44
-0.0038
VAL 44
ASN 45
0.2689
ASN 45
GLY 46
-0.0231
GLY 46
ASP 47
0.0639
ASP 47
VAL 48
-0.0585
VAL 48
ILE 49
0.0600
ILE 49
THR 50
0.1447
THR 50
ILE 51
-0.0163
ILE 51
LYS 52
0.2351
LYS 52
SER 53
0.0166
SER 53
GLU 54
0.1190
GLU 54
SER 55
-0.0180
SER 55
SER 55
-0.0010
SER 55
THR 56
-0.0245
THR 56
THR 56
-0.0034
THR 56
PHE 57
0.0137
PHE 57
PHE 57
-0.0014
PHE 57
LYS 58
0.0591
LYS 58
LYS 58
-0.0062
LYS 58
ASN 59
-0.0603
ASN 59
THR 60
0.2726
THR 60
GLU 61
0.0282
GLU 61
ILE 62
0.3734
ILE 62
SER 63
-0.1601
SER 63
PHE 64
0.4396
PHE 64
ILE 65
0.2299
ILE 65
LEU 66
-0.0608
LEU 66
GLY 67
0.1099
GLY 67
GLN 68
-0.1193
GLN 68
GLU 69
0.0361
GLU 69
PHE 70
0.1151
PHE 70
ASP 71
0.0309
ASP 71
GLU 72
0.2703
GLU 72
VAL 73
0.2753
VAL 73
THR 74
0.0447
THR 74
ALA 75
0.3637
ALA 75
ASP 76
-0.2373
ASP 76
ASP 77
0.1109
ASP 77
ARG 78
0.0160
ARG 78
LYS 79
0.1522
LYS 79
VAL 80
0.1046
VAL 80
LYS 81
0.2309
LYS 81
SER 82
0.0262
SER 82
THR 83
0.2378
THR 83
ILE 84
0.1242
ILE 84
THR 85
0.1127
THR 85
LEU 86
0.0596
LEU 86
ASP 87
0.0541
ASP 87
GLY 88
0.1260
GLY 88
GLY 88
0.0011
GLY 88
GLY 89
-0.0825
GLY 89
GLY 89
-0.0011
GLY 89
VAL 90
0.2777
VAL 90
LEU 91
0.0183
LEU 91
VAL 92
0.2191
VAL 92
HIS 93
0.3247
HIS 93
VAL 94
0.2328
VAL 94
GLN 95
0.3256
GLN 95
LYS 96
0.0753
LYS 96
TRP 97
0.1517
TRP 97
ASP 98
-0.0951
ASP 98
GLY 99
-0.0263
GLY 99
LYS 100
0.1302
LYS 100
SER 101
0.3079
SER 101
THR 102
0.1942
THR 102
THR 103
0.4389
THR 103
ILE 104
0.1342
ILE 104
LYS 105
0.2724
LYS 105
ARG 106
0.2564
ARG 106
LYS 107
0.1117
LYS 107
ARG 108
0.1963
ARG 108
GLU 109
-0.0631
GLU 109
ASP 110
0.1499
ASP 110
ASP 111
-0.2035
ASP 111
LYS 112
0.2723
LYS 112
LEU 113
0.0108
LEU 113
VAL 114
0.4360
VAL 114
VAL 115
0.2335
VAL 115
GLU 116
0.1760
GLU 116
GLU 116
-0.0147
GLU 116
CYS 117
0.2638
CYS 117
VAL 118
0.1071
VAL 118
MET 119
0.3290
MET 119
LYS 120
0.0021
LYS 120
LYS 120
0.0008
LYS 120
GLY 121
-0.0411
GLY 121
GLY 121
0.0024
GLY 121
VAL 122
-0.0504
VAL 122
THR 123
0.2296
THR 123
SER 124
0.1038
SER 124
THR 125
0.2878
THR 125
ARG 126
0.0957
ARG 126
VAL 127
0.3074
VAL 127
TYR 128
0.2602
TYR 128
GLU 129
0.0560
GLU 129
GLU 129
-0.0045
GLU 129
ARG 130
0.1198
ARG 130
ALA 131
-0.1287
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.