CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  Practical_lesson_jeandi  ***

CA strain for 22012513052293587

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLN -7GLN -6 0.0092
GLN -6MET -5 -0.0035
MET -5MET -5 0.0028
MET -5GLY -4 -0.0766
GLY -4ARG -3 -0.1885
ARG -3GLY -2 0.0898
GLY -2SER -1 0.0748
SER -1MET 0 0.0149
MET 0MET 0 -0.0020
MET 0CYS 1 -0.0037
CYS 1CYS 1 -0.0008
CYS 1ASP 2 -0.0052
ASP 2ALA 3 -0.0226
ALA 3PHE 4 -0.0008
PHE 4VAL 5 -0.0004
VAL 5GLY 6 -0.0050
GLY 6THR 7 -0.0025
THR 7TRP 8 -0.0006
TRP 8LYS 9 -0.0008
LYS 9LEU 10 -0.0008
LEU 10VAL 11 -0.0001
VAL 11SER 12 -0.0008
SER 12SER 13 0.0000
SER 13SER 13 0.0011
SER 13GLU 14 -0.0008
GLU 14GLU 14 -0.0009
GLU 14ASN 15 -0.0001
ASN 15ASN 15 -0.0023
ASN 15PHE 16 -0.0004
PHE 16ASP 17 0.0006
ASP 17ASP 18 -0.0004
ASP 18TYR 19 0.0003
TYR 19MET 20 0.0006
MET 20LYS 21 0.0002
LYS 21GLU 22 -0.0002
GLU 22VAL 23 -0.0011
VAL 23GLY 24 0.0013
GLY 24VAL 25 0.0002
VAL 25GLY 26 -0.0005
GLY 26PHE 27 -0.0006
PHE 27ALA 28 -0.0001
ALA 28THR 29 -0.0015
THR 29ARG 30 0.0000
ARG 30LYS 31 0.0006
LYS 31VAL 32 -0.0017
VAL 32ALA 33 0.0014
ALA 33GLY 34 -0.0006
GLY 34MET 35 -0.0001
MET 35ALA 36 -0.0008
ALA 36LYS 37 -0.0001
LYS 37PRO 38 -0.0007
PRO 38PRO 38 0.0046
PRO 38ASN 39 -0.0007
ASN 39ASN 39 -0.0008
ASN 39MET 40 0.0002
MET 40MET 40 -0.0006
MET 40ILE 41 -0.0009
ILE 41ILE 42 -0.0018
ILE 42SER 43 -0.0013
SER 43VAL 44 0.0006
VAL 44ASN 45 0.0165
ASN 45GLY 46 -0.0497
GLY 46ASP 47 -0.0989
ASP 47VAL 48 0.0045
VAL 48ILE 49 0.0011
ILE 49THR 50 -0.0020
THR 50ILE 51 -0.0069
ILE 51LYS 52 -0.0004
LYS 52SER 53 -0.0034
SER 53GLU 54 0.0005
GLU 54SER 55 -0.0021
SER 55THR 56 -0.0010
THR 56PHE 57 0.0014
PHE 57LYS 58 -0.0016
LYS 58ASN 59 -0.0017
ASN 59THR 60 -0.0000
THR 60GLU 61 -0.0068
GLU 61ILE 62 -0.0001
ILE 62SER 63 -0.0098
SER 63PHE 64 0.0049
PHE 64ILE 65 0.0022
ILE 65LEU 66 0.0013
LEU 66GLY 67 0.0019
GLY 67GLN 68 -0.0021
GLN 68GLU 69 -0.0013
GLU 69GLU 69 0.0077
GLU 69PHE 70 -0.0002
PHE 70PHE 70 -0.0073
PHE 70ASP 71 -0.0011
ASP 71ASP 71 0.0008
ASP 71GLU 72 0.0013
GLU 72VAL 73 -0.0005
VAL 73THR 74 -0.0001
THR 74ALA 75 0.0028
ALA 75ASP 76 -0.0023
ASP 76ASP 77 0.0005
ASP 77ARG 78 0.0013
ARG 78LYS 79 -0.0010
LYS 79VAL 80 0.0004
VAL 80LYS 81 0.0005
LYS 81SER 82 0.0006
SER 82THR 83 0.0016
THR 83ILE 84 0.0017
ILE 84THR 85 -0.0003
THR 85LEU 86 0.0013
LEU 86ASP 87 0.0020
ASP 87GLY 88 0.0016
GLY 88GLY 88 0.0016
GLY 88GLY 89 -0.0015
GLY 89GLY 89 -0.0003
GLY 89VAL 90 0.0074
VAL 90LEU 91 -0.0001
LEU 91LEU 91 0.0095
LEU 91VAL 92 0.0015
VAL 92HIS 93 0.0030
HIS 93VAL 94 0.0013
VAL 94GLN 95 0.0023
GLN 95LYS 96 0.0006
LYS 96TRP 97 0.0006
TRP 97ASP 98 -0.0011
ASP 98GLY 99 0.0001
GLY 99LYS 100 -0.0001
LYS 100SER 101 0.0012
SER 101THR 102 0.0007
THR 102THR 103 0.0026
THR 103ILE 104 0.0001
ILE 104ILE 104 0.0044
ILE 104LYS 105 0.0014
LYS 105ARG 106 -0.0006
ARG 106LYS 107 -0.0020
LYS 107ARG 108 -0.0021
ARG 108GLU 109 0.0005
GLU 109ASP 110 -0.0004
ASP 110ASP 111 0.0006
ASP 111LYS 112 -0.0001
LYS 112LYS 112 -0.0153
LYS 112LEU 113 0.0001
LEU 113LEU 113 -0.0139
LEU 113VAL 114 0.0002
VAL 114VAL 115 -0.0006
VAL 115GLU 116 -0.0001
GLU 116GLU 116 -0.0017
GLU 116CYS 117 0.0005
CYS 117VAL 118 0.0002
VAL 118MET 119 0.0011
MET 119MET 119 0.0006
MET 119LYS 120 0.0002
LYS 120GLY 121 -0.0006
GLY 121VAL 122 -0.0004
VAL 122THR 123 0.0008
THR 123SER 124 -0.0008
SER 124THR 125 -0.0004
THR 125ARG 126 -0.0004
ARG 126VAL 127 -0.0003
VAL 127TYR 128 -0.0008
TYR 128GLU 129 -0.0004
GLU 129GLU 129 -0.0047
GLU 129ARG 130 -0.0005
ARG 130ALA 131 -0.0012

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.