Should you encounter any unexpected behaviour,
please let us know.

* Practical_lesson_jeandi *

CA strain for 22012513052293587

--- normal mode 10 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
GLN -7 GLN -6 -0.0243

GLN -6 MET -5 0.0061

MET -5 MET -5 -0.0005

MET -5 GLY -4 0.1214

GLY -4 ARG -3 0.1109

ARG -3 GLY -2 0.0966

GLY -2 SER -1 0.0835

SER -1 MET 0 -0.0094

MET 0 MET 0 0.0041

MET 0 CYS 1 0.0153

CYS 1 CYS 1 0.0030

CYS 1 ASP 2 -0.0056

ASP 2 ALA 3 0.0698

ALA 3 PHE 4 -0.0073

PHE 4 VAL 5 -0.0021

VAL 5 GLY 6 0.0048

GLY 6 THR 7 0.0056

THR 7 TRP 8 -0.0010

TRP 8 LYS 9 0.0043

LYS 9 LEU 10 0.0012

LEU 10 VAL 11 -0.0021

VAL 11 SER 12 0.0010

SER 12 SER 13 0.0045

SER 13 SER 13 -0.0001

SER 13 GLU 14 -0.0012

GLU 14 GLU 14 0.0006

GLU 14 ASN 15 0.0011

ASN 15 ASN 15 0.0040

ASN 15 PHE 16 -0.0026

PHE 16 ASP 17 0.0045

ASP 17 ASP 18 -0.0019

ASP 18 TYR 19 -0.0015

TYR 19 MET 20 0.0007

MET 20 LYS 21 0.0004

LYS 21 GLU 22 -0.0009

GLU 22 VAL 23 -0.0024

VAL 23 GLY 24 0.0012

GLY 24 VAL 25 0.0016

VAL 25 GLY 26 -0.0027

GLY 26 PHE 27 -0.0042

PHE 27 ALA 28 0.0008

ALA 28 THR 29 -0.0044

THR 29 ARG 30 -0.0003

ARG 30 LYS 31 -0.0003

LYS 31 VAL 32 -0.0055

VAL 32 ALA 33 0.0029

ALA 33 GLY 34 -0.0025

GLY 34 MET 35 -0.0037

MET 35 ALA 36 -0.0018

ALA 36 LYS 37 0.0050

LYS 37 PRO 38 -0.0023

PRO 38 PRO 38 -0.0045

PRO 38 ASN 39 -0.0008

ASN 39 ASN 39 0.0002

ASN 39 MET 40 0.0008

MET 40 MET 40 0.0000

MET 40 ILE 41 -0.0025

ILE 41 ILE 42 -0.0016

ILE 42 SER 43 -0.0046

SER 43 VAL 44 -0.0185

VAL 44 ASN 45 0.0435

ASN 45 GLY 46 -0.0908

GLY 46 ASP 47 -0.1732

ASP 47 VAL 48 0.0090

VAL 48 ILE 49 0.0097

ILE 49 THR 50 -0.0048

THR 50 ILE 51 -0.0195

ILE 51 LYS 52 -0.0016

LYS 52 SER 53 -0.0092

SER 53 GLU 54 -0.0002

GLU 54 SER 55 -0.0043

SER 55 THR 56 -0.0019

THR 56 PHE 57 0.0037

PHE 57 LYS 58 -0.0055

LYS 58 ASN 59 -0.0063

ASN 59 THR 60 0.0003

THR 60 GLU 61 -0.0200

GLU 61 ILE 62 0.0011

ILE 62 SER 63 -0.0260

SER 63 PHE 64 0.0165

PHE 64 ILE 65 0.0097

ILE 65 LEU 66 0.0042

LEU 66 GLY 67 -0.0052

GLY 67 GLN 68 -0.0045

GLN 68 GLU 69 -0.0060

GLU 69 GLU 69 0.0074

GLU 69 PHE 70 -0.0002

PHE 70 PHE 70 0.0292

PHE 70 ASP 71 -0.0039

ASP 71 ASP 71 0.0009

ASP 71 GLU 72 0.0042

GLU 72 VAL 73 -0.0019

VAL 73 THR 74 -0.0009

THR 74 ALA 75 0.0074

ALA 75 ASP 76 -0.0068

ASP 76 ASP 77 0.0008

ASP 77 ARG 78 0.0038

ARG 78 LYS 79 -0.0025

LYS 79 VAL 80 -0.0001

VAL 80 LYS 81 0.0012

LYS 81 SER 82 -0.0003

SER 82 THR 83 0.0013

THR 83 ILE 84 0.0001

ILE 84 THR 85 -0.0001

THR 85 LEU 86 -0.0075

LEU 86 ASP 87 -0.0031

ASP 87 GLY 88 0.0026

GLY 88 GLY 88 -0.0003

GLY 88 GLY 89 -0.0025

GLY 89 GLY 89 -0.0006

GLY 89 VAL 90 0.0110

VAL 90 LEU 91 0.0001

LEU 91 LEU 91 0.0009

LEU 91 VAL 92 0.0001

VAL 92 HIS 93 0.0030

HIS 93 VAL 94 0.0011

VAL 94 GLN 95 0.0018

GLN 95 LYS 96 0.0006

LYS 96 TRP 97 0.0008

TRP 97 ASP 98 -0.0049

ASP 98 GLY 99 -0.0002

GLY 99 LYS 100 0.0011

LYS 100 SER 101 0.0018

SER 101 THR 102 0.0018

THR 102 THR 103 0.0042

THR 103 ILE 104 0.0010

ILE 104 ILE 104 0.0044

ILE 104 LYS 105 0.0036

LYS 105 ARG 106 0.0023

ARG 106 LYS 107 -0.0029

LYS 107 ARG 108 0.0009

ARG 108 GLU 109 0.0082

GLU 109 ASP 110 -0.0014

ASP 110 ASP 111 -0.0026

ASP 111 LYS 112 0.0007

LYS 112 LYS 112 0.0188

LYS 112 LEU 113 -0.0014

LEU 113 LEU 113 -0.0029

LEU 113 VAL 114 0.0043

VAL 114 VAL 115 0.0008

VAL 115 GLU 116 0.0010

GLU 116 GLU 116 0.0017

GLU 116 CYS 117 0.0028

CYS 117 VAL 118 0.0003

VAL 118 MET 119 0.0029

MET 119 MET 119 0.0120

MET 119 LYS 120 0.0001

LYS 120 GLY 121 -0.0006

GLY 121 VAL 122 0.0003

VAL 122 THR 123 0.0015

THR 123 SER 124 -0.0005

SER 124 THR 125 0.0018

THR 125 ARG 126 0.0007

ARG 126 VAL 127 0.0027

VAL 127 TYR 128 0.0014

TYR 128 GLU 129 -0.0014

GLU 129 GLU 129 -0.0000

GLU 129 ARG 130 0.0042

ARG 130 ALA 131 -0.0001

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.

Should you encounter any unexpected behaviour, please let us know.

*** Practical_lesson_jeandi ***

CA strain for 22012513052293587

--- normal mode 10 ---

Should you encounter any unexpected behaviour,
please let us know.

* Practical_lesson_jeandi *