CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  Practical_lesson_jeandi  ***

CA strain for 22012513052293587

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLN -7GLN -6 -0.0243
GLN -6MET -5 0.0061
MET -5MET -5 -0.0005
MET -5GLY -4 0.1214
GLY -4ARG -3 0.1109
ARG -3GLY -2 0.0966
GLY -2SER -1 0.0835
SER -1MET 0 -0.0094
MET 0MET 0 0.0041
MET 0CYS 1 0.0153
CYS 1CYS 1 0.0030
CYS 1ASP 2 -0.0056
ASP 2ALA 3 0.0698
ALA 3PHE 4 -0.0073
PHE 4VAL 5 -0.0021
VAL 5GLY 6 0.0048
GLY 6THR 7 0.0056
THR 7TRP 8 -0.0010
TRP 8LYS 9 0.0043
LYS 9LEU 10 0.0012
LEU 10VAL 11 -0.0021
VAL 11SER 12 0.0010
SER 12SER 13 0.0045
SER 13SER 13 -0.0001
SER 13GLU 14 -0.0012
GLU 14GLU 14 0.0006
GLU 14ASN 15 0.0011
ASN 15ASN 15 0.0040
ASN 15PHE 16 -0.0026
PHE 16ASP 17 0.0045
ASP 17ASP 18 -0.0019
ASP 18TYR 19 -0.0015
TYR 19MET 20 0.0007
MET 20LYS 21 0.0004
LYS 21GLU 22 -0.0009
GLU 22VAL 23 -0.0024
VAL 23GLY 24 0.0012
GLY 24VAL 25 0.0016
VAL 25GLY 26 -0.0027
GLY 26PHE 27 -0.0042
PHE 27ALA 28 0.0008
ALA 28THR 29 -0.0044
THR 29ARG 30 -0.0003
ARG 30LYS 31 -0.0003
LYS 31VAL 32 -0.0055
VAL 32ALA 33 0.0029
ALA 33GLY 34 -0.0025
GLY 34MET 35 -0.0037
MET 35ALA 36 -0.0018
ALA 36LYS 37 0.0050
LYS 37PRO 38 -0.0023
PRO 38PRO 38 -0.0045
PRO 38ASN 39 -0.0008
ASN 39ASN 39 0.0002
ASN 39MET 40 0.0008
MET 40MET 40 0.0000
MET 40ILE 41 -0.0025
ILE 41ILE 42 -0.0016
ILE 42SER 43 -0.0046
SER 43VAL 44 -0.0185
VAL 44ASN 45 0.0435
ASN 45GLY 46 -0.0908
GLY 46ASP 47 -0.1732
ASP 47VAL 48 0.0090
VAL 48ILE 49 0.0097
ILE 49THR 50 -0.0048
THR 50ILE 51 -0.0195
ILE 51LYS 52 -0.0016
LYS 52SER 53 -0.0092
SER 53GLU 54 -0.0002
GLU 54SER 55 -0.0043
SER 55THR 56 -0.0019
THR 56PHE 57 0.0037
PHE 57LYS 58 -0.0055
LYS 58ASN 59 -0.0063
ASN 59THR 60 0.0003
THR 60GLU 61 -0.0200
GLU 61ILE 62 0.0011
ILE 62SER 63 -0.0260
SER 63PHE 64 0.0165
PHE 64ILE 65 0.0097
ILE 65LEU 66 0.0042
LEU 66GLY 67 -0.0052
GLY 67GLN 68 -0.0045
GLN 68GLU 69 -0.0060
GLU 69GLU 69 0.0074
GLU 69PHE 70 -0.0002
PHE 70PHE 70 0.0292
PHE 70ASP 71 -0.0039
ASP 71ASP 71 0.0009
ASP 71GLU 72 0.0042
GLU 72VAL 73 -0.0019
VAL 73THR 74 -0.0009
THR 74ALA 75 0.0074
ALA 75ASP 76 -0.0068
ASP 76ASP 77 0.0008
ASP 77ARG 78 0.0038
ARG 78LYS 79 -0.0025
LYS 79VAL 80 -0.0001
VAL 80LYS 81 0.0012
LYS 81SER 82 -0.0003
SER 82THR 83 0.0013
THR 83ILE 84 0.0001
ILE 84THR 85 -0.0001
THR 85LEU 86 -0.0075
LEU 86ASP 87 -0.0031
ASP 87GLY 88 0.0026
GLY 88GLY 88 -0.0003
GLY 88GLY 89 -0.0025
GLY 89GLY 89 -0.0006
GLY 89VAL 90 0.0110
VAL 90LEU 91 0.0001
LEU 91LEU 91 0.0009
LEU 91VAL 92 0.0001
VAL 92HIS 93 0.0030
HIS 93VAL 94 0.0011
VAL 94GLN 95 0.0018
GLN 95LYS 96 0.0006
LYS 96TRP 97 0.0008
TRP 97ASP 98 -0.0049
ASP 98GLY 99 -0.0002
GLY 99LYS 100 0.0011
LYS 100SER 101 0.0018
SER 101THR 102 0.0018
THR 102THR 103 0.0042
THR 103ILE 104 0.0010
ILE 104ILE 104 0.0044
ILE 104LYS 105 0.0036
LYS 105ARG 106 0.0023
ARG 106LYS 107 -0.0029
LYS 107ARG 108 0.0009
ARG 108GLU 109 0.0082
GLU 109ASP 110 -0.0014
ASP 110ASP 111 -0.0026
ASP 111LYS 112 0.0007
LYS 112LYS 112 0.0188
LYS 112LEU 113 -0.0014
LEU 113LEU 113 -0.0029
LEU 113VAL 114 0.0043
VAL 114VAL 115 0.0008
VAL 115GLU 116 0.0010
GLU 116GLU 116 0.0017
GLU 116CYS 117 0.0028
CYS 117VAL 118 0.0003
VAL 118MET 119 0.0029
MET 119MET 119 0.0120
MET 119LYS 120 0.0001
LYS 120GLY 121 -0.0006
GLY 121VAL 122 0.0003
VAL 122THR 123 0.0015
THR 123SER 124 -0.0005
SER 124THR 125 0.0018
THR 125ARG 126 0.0007
ARG 126VAL 127 0.0027
VAL 127TYR 128 0.0014
TYR 128GLU 129 -0.0014
GLU 129GLU 129 -0.0000
GLU 129ARG 130 0.0042
ARG 130ALA 131 -0.0001

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.