This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
GLU 33
GLY 34
-0.1274
GLY 34
LYS 35
-0.0242
LYS 35
PRO 36
-0.0062
PRO 36
TRP 37
0.0330
TRP 37
TRP 38
0.0053
TRP 38
LEU 39
-0.1385
LEU 39
VAL 40
0.1792
VAL 40
VAL 41
-0.0392
VAL 41
VAL 42
-0.1228
VAL 42
GLY 43
0.0130
GLY 43
VAL 44
0.0662
VAL 44
LEU 45
-0.1099
LEU 45
VAL 46
-0.0250
VAL 46
VAL 47
0.0283
VAL 47
GLY 48
-0.0214
GLY 48
LEU 49
-0.0311
LEU 49
LEU 50
0.0129
LEU 50
VAL 51
-0.0071
VAL 51
GLY 52
-0.0371
GLY 52
MET 53
0.0079
MET 53
VAL 54
-0.0008
VAL 54
GLY 55
-0.0418
GLY 55
MET 56
-0.0137
MET 56
THR 57
-0.0115
THR 57
VAL 58
-0.0065
VAL 58
ALA 59
-0.0096
ALA 59
SER 60
0.0004
SER 60
GLY 61
-0.0062
GLY 61
SER 62
0.0247
SER 62
ARG 63
-0.0051
ARG 63
LEU 64
0.0097
LEU 64
PHE 65
-0.0077
PHE 65
LEU 66
-0.0114
LEU 66
GLY 67
0.0185
GLY 67
ALA 68
0.0157
ALA 68
GLY 69
-0.0494
GLY 69
ALA 70
-0.0538
ALA 70
ILE 71
-0.0298
ILE 71
PHE 72
-0.0202
PHE 72
ALA 73
0.0074
ALA 73
ILE 74
0.0118
ILE 74
PHE 75
-0.0370
PHE 75
MET 76
-0.0835
MET 76
ILE 77
0.0889
ILE 77
GLY 78
-0.0749
GLY 78
GLY 79
-0.1829
GLY 79
VAL 80
0.0425
VAL 80
ALA 81
-0.0242
ALA 81
MET 82
-0.0131
MET 82
MET 83
-0.0070
MET 83
MET 84
-0.0101
MET 84
PHE 85
-0.0213
PHE 85
GLY 86
0.0258
GLY 86
GLY 87
-0.0174
GLY 87
ARG 88
-0.0002
ARG 88
PHE 89
-0.0070
PHE 89
GLY 90
0.0316
GLY 90
GLY 91
0.0266
GLY 91
GLN 92
-0.0944
GLN 92
GLN 93
0.0001
GLN 93
GLN 94
0.0307
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.