This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
ARG 2
0.0924
ARG 2
LEU 3
0.0571
LEU 3
GLN 4
-0.0152
GLN 4
GLY 5
-0.0428
GLY 5
ALA 6
0.1016
ALA 6
ILE 7
0.0214
ILE 7
PHE 8
-0.1203
PHE 8
VAL 9
0.2142
VAL 9
LEU 10
0.0091
LEU 10
LEU 11
-0.0770
LEU 11
PRO 12
-0.0655
PRO 12
HIS 13
0.1813
HIS 13
LEU 14
-0.5097
LEU 14
GLY 15
0.1057
GLY 15
PRO 16
0.1199
PRO 16
ILE 17
-0.1026
ILE 17
LEU 18
0.1795
LEU 18
VAL 19
0.0163
VAL 19
TRP 20
-0.1563
TRP 20
LEU 21
0.1043
LEU 21
PHE 22
-0.0147
PHE 22
THR 23
0.0076
THR 23
ARG 24
-0.0251
ARG 24
ASP 25
0.0689
ASP 25
HIS 26
-0.0793
HIS 26
MET 27
-0.0158
MET 27
SER 28
0.0246
SER 28
GLY 29
0.0201
GLY 29
TRP 30
-0.2858
TRP 30
CYS 31
-0.2646
CYS 31
GLU 32
0.1464
GLU 32
GLY 33
-0.0099
GLY 33
PRO 34
-0.0930
PRO 34
ARG 35
0.2368
ARG 35
MET 36
-0.2009
MET 36
LEU 37
0.3557
LEU 37
SER 38
-0.1083
SER 38
TRP 39
-0.2875
TRP 39
CYS 40
0.0444
CYS 40
PRO 41
0.0323
PRO 41
PHE 42
0.0074
PHE 42
TYR 43
0.2053
TYR 43
LYS 44
-0.5748
LYS 44
VAL 45
0.0370
VAL 45
LEU 46
0.1163
LEU 46
LEU 47
0.0469
LEU 47
LEU 48
0.0450
LEU 48
VAL 49
0.1735
VAL 49
GLN 50
-0.0990
GLN 50
THR 51
0.1298
THR 51
ALA 52
0.1229
ALA 52
ILE 53
-0.0585
ILE 53
TYR 54
-0.0208
TYR 54
SER 55
0.4491
SER 55
VAL 56
-0.1805
VAL 56
VAL 57
-0.0371
VAL 57
GLY 58
0.0200
GLY 58
TYR 59
0.0769
TYR 59
ALA 60
-0.0713
ALA 60
SER 61
-0.0288
SER 61
TYR 62
0.0343
TYR 62
LEU 63
-0.1025
LEU 63
VAL 64
-0.0694
VAL 64
TRP 65
0.0347
TRP 65
LYS 66
-0.0826
LYS 66
ASP 67
-0.0132
ASP 67
LEU 68
0.1126
LEU 68
GLY 69
0.0076
GLY 69
GLY 70
-0.0281
GLY 70
GLY 71
0.0159
GLY 71
LEU 72
-0.1107
LEU 72
GLY 73
0.0583
GLY 73
TRP 74
0.0513
TRP 74
PRO 75
0.0147
PRO 75
LEU 76
-0.0497
LEU 76
ALA 77
-0.0338
ALA 77
LEU 78
0.0966
LEU 78
PRO 79
-0.0736
PRO 79
LEU 80
0.0737
LEU 80
GLY 81
-0.0997
GLY 81
LEU 82
0.1266
LEU 82
TYR 83
0.1043
TYR 83
ALA 84
0.0397
ALA 84
VAL 85
0.0747
VAL 85
GLN 86
0.0535
GLN 86
LEU 87
0.0761
LEU 87
THR 88
0.2300
THR 88
ILE 89
0.0156
ILE 89
SER 90
0.0408
SER 90
TRP 91
-0.0121
TRP 91
THR 92
0.2140
THR 92
VAL 93
-0.0904
VAL 93
LEU 94
-0.0394
LEU 94
VAL 95
0.0440
VAL 95
LEU 96
-0.1223
LEU 96
PHE 97
0.0353
PHE 97
PHE 98
-0.0592
PHE 98
THR 99
0.0629
THR 99
VAL 100
-0.1913
VAL 100
HIS 101
0.0707
HIS 101
ASN 102
-0.1115
ASN 102
PRO 103
-0.0405
PRO 103
GLY 104
-0.0420
GLY 104
LEU 105
-0.0557
LEU 105
ALA 106
-0.0383
ALA 106
LEU 107
-0.0853
LEU 107
LEU 108
-0.1983
LEU 108
HIS 109
-0.0053
HIS 109
LEU 110
-0.0248
LEU 110
LEU 111
-0.1734
LEU 111
LEU 112
-0.2304
LEU 112
LEU 113
0.1242
LEU 113
TYR 114
-0.0493
TYR 114
GLY 115
-0.1679
GLY 115
LEU 116
-0.0337
LEU 116
VAL 117
-0.0489
VAL 117
VAL 118
-0.0535
VAL 118
SER 119
-0.1151
SER 119
THR 120
0.0535
THR 120
ALA 121
-0.0535
ALA 121
LEU 122
-0.0885
LEU 122
ILE 123
0.1202
ILE 123
TRP 124
-0.0217
TRP 124
HIS 125
-0.0133
HIS 125
PRO 126
0.0135
PRO 126
ILE 127
0.0076
ILE 127
ASN 128
0.0940
ASN 128
LYS 129
0.0503
LYS 129
LEU 130
-0.1809
LEU 130
ALA 131
-0.0285
ALA 131
ALA 132
-0.0311
ALA 132
LEU 133
-0.0919
LEU 133
LEU 134
-0.0426
LEU 134
LEU 135
0.1158
LEU 135
LEU 136
-0.1538
LEU 136
PRO 137
0.0033
PRO 137
TYR 138
-0.0763
TYR 138
LEU 139
0.0211
LEU 139
ALA 140
-0.1949
ALA 140
TRP 141
0.0289
TRP 141
LEU 142
-0.1532
LEU 142
THR 143
-0.1254
THR 143
VAL 144
-0.4087
VAL 144
THR 145
-0.1411
THR 145
SER 146
0.1457
SER 146
ALA 147
-0.3798
ALA 147
LEU 148
0.0324
LEU 148
THR 149
-0.0256
THR 149
TYR 150
0.0300
TYR 150
HIS 151
-0.1444
HIS 151
LEU 152
0.1134
LEU 152
TRP 153
-0.0233
TRP 153
ARG 154
-0.0825
ARG 154
ASP 155
-0.0985
ASP 155
SER 156
-0.0766
SER 156
LEU 157
-0.3282
LEU 157
CYS 158
0.2034
CYS 158
PRO 159
0.0067
PRO 159
VAL 160
0.0011
VAL 160
HIS 161
0.0924
HIS 161
GLN 162
-0.0497
GLN 162
PRO 163
0.1664
PRO 163
GLN 164
-0.0950
GLN 164
PRO 165
0.0685
PRO 165
THR 166
0.0111
THR 166
GLU 167
-0.1241
GLU 167
LYS 168
0.0478
LYS 168
SER 169
0.2181
SER 169
ASP 170
-0.1501
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.