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***  MEMBRANE PROTEIN 03-OCT-98 1BXW  ***

CA strain for 211110112414111913

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ALA 1 -0.0146
ALA 1PRO 2 0.0021
PRO 2LYS 3 0.0047
LYS 3ASP 4 0.0027
ASP 4ASN 5 0.0059
ASN 5THR 6 0.0171
THR 6TRP 7 0.0196
TRP 7TYR 8 0.0335
TYR 8THR 9 0.0374
THR 9GLY 10 0.0593
GLY 10ALA 11 0.0998
ALA 11LYS 12 0.0536
LYS 12LEU 13 0.1023
LEU 13GLY 14 0.0179
GLY 14TRP 15 0.0540
TRP 15SER 16 0.0431
SER 16GLN 17 -0.0138
GLN 17TYR 18 0.0295
TYR 18HIS 19 0.0061
HIS 19ASP 20 -0.0992
ASP 20THR 21 -0.2630
THR 21GLY 22 -0.0282
GLY 22LEU 23 -0.0140
LEU 23ILE 24 -0.0506
ILE 24ASN 25 0.0003
ASN 25ASN 26 0.0396
ASN 26ASN 27 0.0442
ASN 27GLY 28 0.1243
GLY 28PRO 29 0.0940
PRO 29THR 30 -0.0473
THR 30HIS 31 0.0106
HIS 31GLU 32 0.0345
GLU 32ASN 33 0.0986
ASN 33LYS 34 0.0484
LYS 34LEU 35 0.0306
LEU 35GLY 36 0.1187
GLY 36ALA 37 0.1205
ALA 37GLY 38 0.0727
GLY 38ALA 39 0.0652
ALA 39PHE 40 0.0710
PHE 40GLY 41 0.0506
GLY 41GLY 42 0.0561
GLY 42TYR 43 0.0414
TYR 43GLN 44 0.0020
GLN 44VAL 45 0.0175
VAL 45ASN 46 0.0077
ASN 46PRO 47 0.0088
PRO 47TYR 48 -0.0129
TYR 48VAL 49 0.0141
VAL 49GLY 50 0.0166
GLY 50PHE 51 0.0168
PHE 51GLU 52 0.0512
GLU 52MET 53 0.0467
MET 53GLY 54 0.0441
GLY 54TYR 55 0.0601
TYR 55ASP 56 0.0238
ASP 56TRP 57 0.0443
TRP 57LEU 58 0.0320
LEU 58GLY 59 0.0967
GLY 59ARG 60 0.1310
ARG 60MET 61 0.0355
MET 61PRO 62 0.1177
PRO 62TYR 63 0.0146
TYR 63LYS 64 0.1826
LYS 64GLY 65 0.0636
GLY 65SER 66 0.1171
SER 66VAL 67 -0.0850
VAL 67GLU 68 -0.0025
GLU 68ASN 69 0.0607
ASN 69GLY 70 0.0476
GLY 70ALA 71 0.1482
ALA 71TYR 72 0.0175
TYR 72LYS 73 0.0366
LYS 73ALA 74 0.0097
ALA 74GLN 75 -0.0252
GLN 75GLY 76 0.0118
GLY 76VAL 77 0.0121
VAL 77GLN 78 0.0212
GLN 78LEU 79 0.0376
LEU 79THR 80 0.0278
THR 80ALA 81 0.0236
ALA 81LYS 82 -0.0053
LYS 82LEU 83 0.0258
LEU 83GLY 84 -0.0041
GLY 84TYR 85 -0.0022
TYR 85PRO 86 -0.0082
PRO 86ILE 87 0.0013
ILE 87THR 88 0.0021
THR 88ASP 89 0.0006
ASP 89ASP 90 0.0038
ASP 90LEU 91 0.0022
LEU 91ASP 92 -0.0043
ASP 92ILE 93 -0.0048
ILE 93TYR 94 0.0056
TYR 94THR 95 0.0001
THR 95ARG 96 0.0278
ARG 96LEU 97 0.0227
LEU 97GLY 98 0.0208
GLY 98GLY 99 0.0423
GLY 99MET 100 0.0159
MET 100VAL 101 0.0227
VAL 101TRP 102 0.0073
TRP 102ARG 103 -0.0132
ARG 103ALA 104 -0.0381
ALA 104ASP 105 -0.0101
ASP 105THR 106 -0.0124
THR 106TYR 107 0.0031
TYR 107SER 108 0.0471
SER 108ASN 109 -0.0384
ASN 109VAL 110 0.0048
VAL 110TYR 111 -0.0276
TYR 111GLY 112 0.0087
GLY 112LYS 113 -0.0009
LYS 113ASN 114 0.0619
ASN 114HIS 115 -0.0084
HIS 115ASP 116 0.0440
ASP 116THR 117 -0.0182
THR 117GLY 118 0.0250
GLY 118VAL 119 0.0405
VAL 119SER 120 0.0372
SER 120PRO 121 0.0861
PRO 121VAL 122 -0.0185
VAL 122PHE 123 0.0386
PHE 123ALA 124 0.0134
ALA 124GLY 125 0.0210
GLY 125GLY 126 0.0154
GLY 126VAL 127 0.0230
VAL 127GLU 128 0.0047
GLU 128TYR 129 -0.0053
TYR 129ALA 130 0.0095
ALA 130ILE 131 -0.0068
ILE 131THR 132 0.0041
THR 132PRO 133 -0.0037
PRO 133GLU 134 -0.0027
GLU 134ILE 135 0.0179
ILE 135ALA 136 0.0075
ALA 136THR 137 0.0444
THR 137ARG 138 0.0245
ARG 138LEU 139 0.0193
LEU 139GLU 140 0.0101
GLU 140TYR 141 0.0330
TYR 141GLN 142 -0.0011
GLN 142TRP 143 0.0245
TRP 143THR 144 0.0421
THR 144ASN 145 0.0237
ASN 145ASN 146 0.0200
ASN 146ILE 147 -0.0133
ILE 147GLY 148 -0.0405
GLY 148ASP 149 -0.0861
ASP 149ALA 150 -0.0922
ALA 150HIS 151 -0.0398
HIS 151THR 152 -0.0459
THR 152ILE 153 -0.0061
ILE 153GLY 154 -0.0470
GLY 154THR 155 -0.0498
THR 155ARG 156 -0.1349
ARG 156PRO 157 0.1618
PRO 157ASP 158 0.0014
ASP 158ASN 159 0.0328
ASN 159GLY 160 0.0563
GLY 160MET 161 0.0166
MET 161LEU 162 0.0113
LEU 162SER 163 0.0143
SER 163LEU 164 0.0309
LEU 164GLY 165 0.0576
GLY 165VAL 166 0.0750
VAL 166SER 167 0.0480
SER 167TYR 168 0.0398
TYR 168ARG 169 0.0200
ARG 169PHE 170 0.0104
PHE 170GLY 171 0.0111

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.