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***  TRANSPORT PROTEIN 02-MAY-09 3HAP  ***

CA strain for 21111011205899072

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 6ARG 7 0.0001
ARG 7ARG 7 -0.0563
ARG 7PRO 8 0.0265
PRO 8GLU 9 0.0001
GLU 9TRP 10 0.0138
TRP 10ILE 11 0.0001
ILE 11TRP 12 0.0320
TRP 12LEU 13 0.0001
LEU 13ALA 14 -0.0355
ALA 14LEU 15 -0.0001
LEU 15LEU 15 -0.0418
LEU 15GLY 16 0.0148
GLY 16THR 17 -0.0001
THR 17THR 17 -0.0365
THR 17ALA 18 -0.0063
ALA 18LEU 19 -0.0000
LEU 19MET 20 0.0239
MET 20GLY 21 0.0001
GLY 21LEU 22 -0.0451
LEU 22GLY 23 0.0001
GLY 23THR 24 0.0200
THR 24LEU 25 0.0000
LEU 25LEU 25 -0.0615
LEU 25TYR 26 -0.0043
TYR 26PHE 27 -0.0001
PHE 27LEU 28 0.1100
LEU 28LEU 28 0.0409
LEU 28VAL 29 -0.0003
VAL 29LYS 30 -0.0005
LYS 30GLY 31 0.0003
GLY 31MET 32 0.0909
MET 32MET 32 0.0094
MET 32GLY 33 -0.0000
GLY 33VAL 34 -0.0296
VAL 34VAL 34 0.0040
VAL 34SER 35 0.0000
SER 35SER 35 -0.0986
SER 35ASP 36 -0.0486
ASP 36PRO 37 0.0000
PRO 37ASP 38 -0.0062
ASP 38ALA 39 -0.0002
ALA 39LYS 40 -0.0246
LYS 40LYS 41 -0.0002
LYS 41LYS 41 -0.0727
LYS 41PHE 42 -0.0436
PHE 42TYR 43 0.0002
TYR 43ALA 44 0.0146
ALA 44ILE 45 -0.0003
ILE 45THR 46 0.0078
THR 46THR 47 -0.0000
THR 47LEU 48 0.0413
LEU 48LEU 48 0.0141
LEU 48VAL 49 0.0002
VAL 49PRO 50 -0.0265
PRO 50ALA 51 -0.0004
ALA 51ILE 52 0.0100
ILE 52ALA 53 0.0003
ALA 53PHE 54 0.0869
PHE 54THR 55 0.0000
THR 55THR 55 -0.0022
THR 55MET 56 -0.0544
MET 56MET 56 0.0733
MET 56TYR 57 0.0001
TYR 57LEU 58 0.0942
LEU 58SER 59 0.0000
SER 59SER 59 -0.0486
SER 59MET 60 -0.0694
MET 60LEU 61 0.0002
LEU 61LEU 62 0.0834
LEU 62GLY 63 0.0000
GLY 63TYR 64 0.1061
TYR 64GLY 65 0.0000
GLY 65LEU 66 -0.1329
LEU 66THR 67 -0.0003
THR 67MET 68 -0.2237
MET 68VAL 69 0.0004
VAL 69PRO 70 -0.0977
PRO 70PHE 71 0.0000
PHE 71GLY 72 -0.0379
GLY 72GLY 73 0.0003
GLY 73GLU 74 -0.0640
GLU 74GLN 75 0.0002
GLN 75ASN 76 -0.0280
ASN 76PRO 77 -0.0001
PRO 77ILE 78 -0.0522
ILE 78TYR 79 0.0000
TYR 79TRP 80 0.0589
TRP 80ALA 81 0.0002
ALA 81ARG 82 0.0075
ARG 82TYR 83 0.0001
TYR 83ALA 84 -0.0339
ALA 84ASP 85 -0.0002
ASP 85TRP 86 0.0459
TRP 86LEU 87 0.0002
LEU 87LEU 87 -0.0086
LEU 87PHE 88 0.0404
PHE 88THR 89 -0.0002
THR 89THR 90 0.0029
THR 90PRO 91 -0.0001
PRO 91LEU 92 0.1617
LEU 92LEU 93 -0.0003
LEU 93LEU 94 -0.1120
LEU 94LEU 95 -0.0000
LEU 95LEU 95 -0.0000
LEU 95ASP 96 0.1321
ASP 96LEU 97 0.0000
LEU 97ALA 98 -0.0686
ALA 98LEU 99 0.0001
LEU 99LEU 100 0.0292
LEU 100LEU 100 0.0115
LEU 100VAL 101 0.0001
VAL 101ASP 102 0.0646
ASP 102ASP 102 0.0155
ASP 102ALA 103 0.0003
ALA 103ASP 104 -0.0341
ASP 104GLN 105 -0.0000
GLN 105GLY 106 0.0486
GLY 106THR 107 0.0003
THR 107THR 107 0.0021
THR 107ILE 108 -0.0593
ILE 108LEU 109 -0.0001
LEU 109ALA 110 -0.0165
ALA 110ALA 111 -0.0000
ALA 111VAL 112 -0.1063
VAL 112GLY 113 0.0001
GLY 113ALA 114 -0.0446
ALA 114ASP 115 -0.0003
ASP 115GLY 116 -0.0743
GLY 116ILE 117 -0.0001
ILE 117MET 118 -0.1040
MET 118ILE 119 0.0003
ILE 119GLY 120 -0.0002
GLY 120THR 121 0.0001
THR 121GLY 122 -0.0374
GLY 122LEU 123 -0.0003
LEU 123VAL 124 -0.0830
VAL 124GLY 125 0.0000
GLY 125ALA 126 -0.0116
ALA 126LEU 127 -0.0003
LEU 127THR 128 -0.1416
THR 128LYS 129 0.0001
LYS 129VAL 130 -0.0484
VAL 130TYR 131 0.0002
TYR 131SER 132 -0.0122
SER 132SER 132 -0.0911
SER 132TYR 133 0.0002
TYR 133ARG 134 -0.0663
ARG 134PHE 135 -0.0003
PHE 135VAL 136 -0.1060
VAL 136TRP 137 0.0001
TRP 137TRP 138 -0.0980
TRP 138ALA 139 0.0000
ALA 139ILE 140 -0.1491
ILE 140SER 141 0.0001
SER 141THR 142 -0.0591
THR 142THR 142 0.0000
THR 142ALA 143 0.0001
ALA 143ALA 144 -0.0736
ALA 144MET 145 -0.0002
MET 145MET 145 -0.0000
MET 145LEU 146 -0.1166
LEU 146TYR 147 0.0003
TYR 147ILE 148 -0.0717
ILE 148LEU 149 -0.0002
LEU 149TYR 150 -0.0413
TYR 150VAL 151 -0.0004
VAL 151VAL 151 0.0056
VAL 151LEU 152 -0.1302
LEU 152PHE 153 0.0001
PHE 153PHE 154 -0.0250
PHE 154GLY 155 -0.0000
GLY 155PHE 156 -0.1062
PHE 156THR 157 0.0004
THR 157SER 158 -0.0835
SER 158SER 158 -0.0000
SER 158LYS 159 -0.0002
LYS 159ALA 160 0.0189
ALA 160GLU 161 -0.0002
GLU 161GLU 161 0.0074
GLU 161GLU 161 -0.0489
GLU 161SER 162 -0.0258
SER 162SER 162 0.0152
SER 162MET 163 0.0001
MET 163ARG 164 0.1742
ARG 164ARG 164 0.0278
ARG 164PRO 165 -0.0000
PRO 165GLU 166 0.0150
GLU 166GLU 166 0.0156
GLU 166VAL 167 -0.0003
VAL 167ALA 168 0.0022
ALA 168SER 169 0.0000
SER 169SER 169 0.0025
SER 169THR 170 -0.0287
THR 170PHE 171 0.0000
PHE 171LYS 172 -0.0274
LYS 172VAL 173 -0.0000
VAL 173LEU 174 -0.0103
LEU 174ARG 175 -0.0004
ARG 175ASN 176 -0.0262
ASN 176VAL 177 0.0002
VAL 177THR 178 -0.0300
THR 178VAL 179 -0.0000
VAL 179VAL 180 -0.0493
VAL 180LEU 181 -0.0003
LEU 181TRP 182 -0.0662
TRP 182SER 183 0.0001
SER 183ALA 184 0.0740
ALA 184TYR 185 -0.0000
TYR 185PRO 186 -0.0603
PRO 186VAL 187 0.0001
VAL 187VAL 188 0.0080
VAL 188TRP 189 0.0003
TRP 189LEU 190 -0.0765
LEU 190ILE 191 0.0005
ILE 191GLY 192 0.0294
GLY 192SER 193 -0.0002
SER 193SER 193 -0.0421
SER 193GLU 194 -0.0394
GLU 194GLY 195 0.0002
GLY 195ALA 196 -0.0443
ALA 196GLY 197 0.0000
GLY 197ILE 198 -0.0220
ILE 198VAL 199 -0.0000
VAL 199PRO 200 0.0489
PRO 200LEU 201 -0.0003
LEU 201ASN 202 -0.0674
ASN 202ILE 203 -0.0001
ILE 203ILE 203 -0.2540
ILE 203GLU 204 0.0301
GLU 204THR 205 -0.0001
THR 205LEU 206 -0.0177
LEU 206LEU 207 0.0003
LEU 207PHE 208 0.0096
PHE 208MET 209 -0.0002
MET 209MET 209 0.0235
MET 209VAL 210 0.0030
VAL 210LEU 211 -0.0000
LEU 211ASP 212 0.0222
ASP 212VAL 213 0.0001
VAL 213SER 214 -0.0219
SER 214ALA 215 0.0002
ALA 215LYS 216 0.0760
LYS 216VAL 217 0.0001
VAL 217GLY 218 0.0119
GLY 218PHE 219 -0.0002
PHE 219GLY 220 0.0718
GLY 220LEU 221 -0.0002
LEU 221ILE 222 0.0353
ILE 222LEU 223 -0.0003
LEU 223LEU 224 0.0765
LEU 224ARG 225 -0.0003
ARG 225ARG 225 -0.0955
ARG 225SER 226 -0.0599
SER 226SER 226 0.0650
SER 226ARG 227 -0.0000
ARG 227ARG 227 -0.0924
ARG 227ALA 228 0.0970
ALA 228ILE 229 0.0001
ILE 229PHE 230 0.0604
PHE 230GLY 231 -0.0000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.