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***  TOXIN (HEMOLYTIC POLYPEPTIDE) 04-OCT-90 2MLT  ***

CA strain for 210723142520129552

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1ILE 2 -0.0085
ILE 2GLY 3 -0.0592
GLY 3ALA 4 -0.1503
ALA 4VAL 5 -0.0186
VAL 5LEU 6 0.0411
LEU 6LYS 7 -0.1121
LYS 7VAL 8 -0.1244
VAL 8LEU 9 0.1487
LEU 9THR 10 0.0488
THR 10THR 11 -0.2387
THR 11GLY 12 -0.1949
GLY 12LEU 13 0.3739
LEU 13PRO 14 -0.0928
PRO 14ALA 15 -0.0145
ALA 15LEU 16 0.2253
LEU 16ILE 17 -0.0106
ILE 17SER 18 0.0423
SER 18TRP 19 0.0380
TRP 19ILE 20 0.0867
ILE 20LYS 21 0.0355
LYS 21ARG 22 0.1308
ARG 22LYS 23 0.0429
LYS 23ARG 24 0.0606
ARG 24GLN 25 0.0098
GLN 25GLN 26 0.0399
GLN 26GLY 1 -0.0596
GLY 1ILE 2 0.0495
ILE 2GLY 3 0.1439
GLY 3ALA 4 0.0107
ALA 4VAL 5 0.0504
VAL 5LEU 6 0.0145
LEU 6LYS 7 0.0004
LYS 7VAL 8 0.0629
VAL 8LEU 9 -0.0370
LEU 9THR 10 -0.0790
THR 10THR 11 0.2101
THR 11GLY 12 0.3383
GLY 12LEU 13 -0.3135
LEU 13PRO 14 0.1023
PRO 14ALA 15 -0.0391
ALA 15LEU 16 -0.3166
LEU 16ILE 17 0.0528
ILE 17SER 18 -0.1099
SER 18TRP 19 -0.1194
TRP 19ILE 20 -0.0512
ILE 20LYS 21 0.0103
LYS 21ARG 22 -0.1571
ARG 22LYS 23 -0.0389
LYS 23ARG 24 -0.0462
ARG 24GLN 25 -0.0412
GLN 25GLN 26 -0.0202

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.