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***  TOXIN (HEMOLYTIC POLYPEPTIDE) 04-OCT-90 2MLT  ***

CA strain for 210723142520129552

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
GLY 1ILE 2 0.0700
ILE 2GLY 3 0.0614
GLY 3ALA 4 -0.0189
ALA 4VAL 5 0.0757
VAL 5LEU 6 0.0146
LEU 6LYS 7 -0.0025
LYS 7VAL 8 -0.0152
VAL 8LEU 9 0.0537
LEU 9THR 10 -0.0931
THR 10THR 11 0.1129
THR 11GLY 12 0.0570
GLY 12LEU 13 0.1962
LEU 13PRO 14 -0.1227
PRO 14ALA 15 0.1447
ALA 15LEU 16 0.0551
LEU 16ILE 17 -0.0096
ILE 17SER 18 0.0049
SER 18TRP 19 0.0160
TRP 19ILE 20 0.0396
ILE 20LYS 21 0.0144
LYS 21ARG 22 0.0394
ARG 22LYS 23 0.0094
LYS 23ARG 24 -0.0173
ARG 24GLN 25 -0.0271
GLN 25GLN 26 0.0180
GLN 26GLY 1 -0.0546
GLY 1ILE 2 0.0728
ILE 2GLY 3 0.0753
GLY 3ALA 4 -0.0583
ALA 4VAL 5 0.0626
VAL 5LEU 6 0.0496
LEU 6LYS 7 -0.0313
LYS 7VAL 8 0.0072
VAL 8LEU 9 0.1176
LEU 9THR 10 -0.0534
THR 10THR 11 0.0581
THR 11GLY 12 0.0512
GLY 12LEU 13 0.0834
LEU 13PRO 14 -0.0754
PRO 14ALA 15 0.1168
ALA 15LEU 16 0.0271
LEU 16ILE 17 -0.0037
ILE 17SER 18 0.0234
SER 18TRP 19 0.0236
TRP 19ILE 20 0.0260
ILE 20LYS 21 -0.0106
LYS 21ARG 22 0.0453
ARG 22LYS 23 0.0070
LYS 23ARG 24 -0.0070
ARG 24GLN 25 -0.0290
GLN 25GLN 26 0.0155

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.