This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
LYS 2
-0.1288
LYS 2
THR 3
0.0674
THR 3
GLU 4
-0.0533
GLU 4
SER 5
0.1066
SER 5
ALA 6
-0.0131
ALA 6
SER 7
0.1529
SER 7
VAL 8
-0.0866
VAL 8
LEU 9
0.0333
LEU 9
PHE 10
-0.0223
PHE 10
LEU 11
0.0027
LEU 11
ASP 12
0.0213
ASP 12
PHE 13
-0.0922
PHE 13
ASP 14
-0.0291
ASP 14
GLY 15
0.2415
GLY 15
VAL 16
-0.0422
VAL 16
THR 17
-0.0298
THR 17
HIS 18
0.0258
HIS 18
PRO 19
-0.0299
PRO 19
ASP 20
-0.0166
ASP 20
PRO 21
-0.0294
PRO 21
CYS 22
0.0083
CYS 22
ASP 23
-0.0401
ASP 23
LYS 24
0.3459
LYS 24
ASP 25
-0.1384
ASP 25
GLN 26
0.1760
GLN 26
LEU 27
0.4107
LEU 27
PHE 28
-0.1260
PHE 28
GLN 29
0.4858
GLN 29
SER 30
-0.0341
SER 30
LEU 31
-0.1679
LEU 31
PRO 32
0.0407
PRO 32
LEU 33
0.0170
LEU 33
ILE 34
-0.1108
ILE 34
GLU 35
-0.0137
GLU 35
GLY 36
0.0260
GLY 36
VAL 37
-0.0012
VAL 37
LEU 38
-0.0381
LEU 38
ARG 39
-0.0198
ARG 39
PRO 40
-0.0075
PRO 40
TYR 41
-0.0364
TYR 41
PRO 42
0.0641
PRO 42
GLY 43
-0.0665
GLY 43
VAL 44
0.0604
VAL 44
LEU 45
-0.0852
LEU 45
VAL 46
-0.0685
VAL 46
VAL 47
-0.0295
VAL 47
LEU 48
-0.0919
LEU 48
SER 49
0.0243
SER 49
THR 50
-0.0443
THR 50
THR 51
-0.0036
THR 51
TRP 52
-0.0851
TRP 52
ARG 53
0.0587
ARG 53
THR 54
0.0143
THR 54
MET 55
-0.0363
MET 55
HIS 56
-0.0760
HIS 56
PRO 57
0.0048
PRO 57
LEU 58
-0.0077
LEU 58
ASP 59
-0.0226
ASP 59
GLU 60
-0.1233
GLU 60
LEU 61
0.0082
LEU 61
LYS 62
0.0478
LYS 62
ASP 63
-0.0511
ASP 63
LEU 64
-0.1022
LEU 64
PHE 65
-0.1577
PHE 65
SER 66
0.0380
SER 66
SER 67
-0.0777
SER 67
ASP 68
0.0268
ASP 68
LEU 69
0.0264
LEU 69
ALA 70
-0.0673
ALA 70
GLU 71
-0.0412
GLU 71
ARG 72
0.0234
ARG 72
MET 73
-0.1051
MET 73
LEU 74
-0.0728
LEU 74
GLY 75
-0.2137
GLY 75
GLY 76
-0.0723
GLY 76
THR 77
-0.0457
THR 77
PRO 78
-0.0516
PRO 78
LEU 79
0.0299
LEU 79
LEU 80
0.0706
LEU 80
ASN 81
-0.0508
ASN 81
LEU 82
-0.0530
LEU 82
TYR 83
-0.1983
TYR 83
ASP 84
-0.0332
ASP 84
LEU 85
0.0280
LEU 85
ALA 86
-0.0261
ALA 86
TRP 87
-0.0910
TRP 87
TYR 88
0.1358
TYR 88
PRO 89
-0.0701
PRO 89
VAL 90
-0.0330
VAL 90
PRO 91
-0.0916
PRO 91
LEU 92
-0.0572
LEU 92
SER 93
-0.1519
SER 93
ALA 94
0.0746
ALA 94
ARG 95
0.0796
ARG 95
SER 96
0.0385
SER 96
ARG 97
-0.0309
ARG 97
GLN 98
-0.0482
GLN 98
ARG 99
0.0362
ARG 99
GLU 100
0.0415
GLU 100
ILE 101
-0.0571
ILE 101
GLU 102
0.0086
GLU 102
ALA 103
-0.0143
ALA 103
TRP 104
0.0115
TRP 104
LEU 105
-0.1640
LEU 105
HIS 106
0.1053
HIS 106
GLN 107
0.0017
GLN 107
ASN 108
-0.1998
ASN 108
ARG 109
-0.2302
ARG 109
THR 110
0.1008
THR 110
LEU 111
-0.1403
LEU 111
ASN 112
0.1381
ASN 112
HIS 113
-0.0961
HIS 113
PRO 114
-0.0125
PRO 114
TRP 115
0.0256
TRP 115
VAL 116
0.0267
VAL 116
ALA 117
0.0351
ALA 117
ILE 118
0.0517
ILE 118
ASP 119
0.0391
ASP 119
ASP 120
0.0832
ASP 120
ARG 121
0.1725
ARG 121
PRO 122
-0.1289
PRO 122
ARG 123
0.1224
ARG 123
TRP 124
-0.0398
TRP 124
PHE 125
0.0144
PHE 125
GLU 126
0.0046
GLU 126
SER 127
0.0427
SER 127
GLU 128
0.0256
GLU 128
CYS 129
-0.0167
CYS 129
THR 130
0.0893
THR 130
ASN 131
-0.0320
ASN 131
LEU 132
0.0938
LEU 132
LEU 133
0.0448
LEU 133
VAL 134
0.0542
VAL 134
THR 135
0.1163
THR 135
SER 136
-0.0194
SER 136
ALA 137
0.0800
ALA 137
LEU 138
0.0386
LEU 138
THR 139
-0.2014
THR 139
GLY 140
0.1447
GLY 140
PHE 141
-0.1240
PHE 141
THR 142
-0.0236
THR 142
GLU 143
0.0360
GLU 143
SER 144
0.1012
SER 144
ASP 145
-0.0005
ASP 145
ALA 146
-0.0731
ALA 146
ASP 147
0.0546
ASP 147
ARG 148
0.0307
ARG 148
LEU 149
0.0086
LEU 149
GLU 150
-0.0078
GLU 150
ASP 151
0.0717
ASP 151
MET 152
-0.0422
MET 152
ILE 153
-0.0156
ILE 153
LEU 154
-0.0210
LEU 154
ARG 155
0.0034
ARG 155
ARG 156
-0.0904
ARG 156
CYS 157
0.0484
CYS 157
SER 158
-0.0932
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.