This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
CYS 1
VAL 2
-0.0410
VAL 2
PHE 3
0.0709
PHE 3
CYS 4
-0.0578
CYS 4
ARG 5
-0.0135
ARG 5
LEU 6
0.0641
LEU 6
PRO 7
0.0130
PRO 7
ALA 8
-0.0079
ALA 8
HIS 9
0.0090
HIS 9
ASP 10
-0.0134
ASP 10
LEU 11
-0.0082
LEU 11
SER 12
0.0122
SER 12
GLY 13
-0.0952
GLY 13
ARG 14
-0.0373
ARG 14
LEU 15
0.0755
LEU 15
ALA 16
0.0525
ALA 16
ARG 17
-0.1041
ARG 17
LEU 18
-0.0036
LEU 18
CYS 19
0.0807
CYS 19
SER 20
-0.0489
SER 20
GLN 21
-0.0725
GLN 21
MET 22
-0.0347
MET 22
GLU 23
0.0263
GLU 23
ALA 24
-0.0658
ALA 24
ARG 25
-0.0174
ARG 25
GLN 26
-0.0372
GLN 26
LYS 27
-0.0501
LYS 27
GLU 28
0.1397
GLU 28
CYS 29
-0.1841
CYS 29
GLY 30
0.0315
GLY 30
ALA 31
-0.0053
ALA 31
SER 32
-0.0530
SER 32
PRO 33
-0.0170
PRO 33
ASP 34
0.1225
ASP 34
PHE 35
0.0608
PHE 35
SER 36
-0.1038
SER 36
ALA 37
0.0173
ALA 37
PHE 38
0.0655
PHE 38
ALA 39
-0.1274
ALA 39
LEU 40
0.0637
LEU 40
ASP 41
-0.0298
ASP 41
GLU 42
-0.0526
GLU 42
VAL 43
-0.0171
VAL 43
SER 44
-0.2182
SER 44
MET 45
-0.2444
MET 45
ASN 46
-0.0132
ASN 46
LYS 47
0.0511
LYS 47
VAL 48
-0.1066
VAL 48
THR 49
0.0559
THR 49
GLU 50
-0.0060
GLU 50
LYS 51
-0.0478
LYS 51
THR 52
0.0630
THR 52
HIS 53
-0.0315
HIS 53
ARG 54
0.0071
ARG 54
VAL 55
-0.2434
VAL 55
LEU 56
-0.0014
LEU 56
ARG 57
-0.0310
ARG 57
VAL 58
-0.1445
VAL 58
MET 59
-0.0925
MET 59
GLU 60
0.0405
GLU 60
ILE 61
-0.0417
ILE 61
LYS 62
-0.1189
LYS 62
GLU 63
-0.0300
GLU 63
ALA 64
-0.0644
ALA 64
VAL 65
0.0485
VAL 65
SER 66
-0.0257
SER 66
SER 67
-0.0415
SER 67
LEU 68
0.0568
LEU 68
PRO 69
0.0282
PRO 69
SER 70
-0.0899
SER 70
TYR 71
0.0202
TYR 71
TRP 72
0.1297
TRP 72
SER 73
-0.0847
SER 73
TRP 74
-0.0072
TRP 74
LEU 75
0.0175
LEU 75
ARG 76
0.0331
ARG 76
LYS 77
-0.0150
LYS 77
THR 78
-0.0160
THR 78
LYS 79
0.0242
LYS 79
LEU 80
0.0024
LEU 80
PRO 81
-0.0076
PRO 81
GLU 82
-0.0359
GLU 82
TYR 83
0.0024
TYR 83
THR 84
0.0290
THR 84
ARG 85
0.0222
ARG 85
GLU 86
0.0138
GLU 86
ALA 87
0.0053
ALA 87
LEU 88
-0.0180
LEU 88
CYS 89
0.0164
CYS 89
PRO 90
-0.0458
PRO 90
PRO 91
-0.1409
PRO 91
ALA 92
0.0093
ALA 92
CYS 93
0.0306
CYS 93
ARG 94
0.0312
ARG 94
GLY 95
-0.0868
GLY 95
SER 96
0.0015
SER 96
THR 97
0.0479
THR 97
THR 98
-0.0941
THR 98
LEU 99
-0.0497
LEU 99
TYR 100
0.0328
TYR 100
ASN 101
-0.1372
ASN 101
CYS 102
-0.0419
CYS 102
SER 103
0.0574
SER 103
THR 104
-0.2259
THR 104
CYS 105
-0.0227
CYS 105
LYS 106
0.0654
LYS 106
GLY 107
-0.0949
GLY 107
THR 108
-0.0258
THR 108
GLU 109
-0.0703
GLU 109
VAL 110
0.0708
VAL 110
SER 111
0.0250
SER 111
CYS 112
0.0247
CYS 112
TRP 113
0.0153
TRP 113
PRO 114
0.0065
PRO 114
ARG 115
-0.0213
ARG 115
LYS 116
-0.1809
LYS 116
ARG 117
-0.0235
ARG 117
CYS 118
-0.0461
CYS 118
PHE 119
-0.0642
PHE 119
PRO 120
0.0294
PRO 120
GLY 121
0.0693
GLY 121
SER 122
-0.0510
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.