Should you encounter any unexpected behaviour,
please let us know.

* *

CA strain for 20112615465264077

--- normal mode 11 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
ALA 23 LEU 24 0.0061

LEU 24 HIS 25 -0.1937

HIS 25 TRP 26 -0.0677

TRP 26 ARG 27 0.0736

ARG 27 ALA 28 -0.1942

ALA 28 ALA 29 -0.0252

ALA 29 GLY 30 -0.0190

GLY 30 ALA 31 -0.0823

ALA 31 ALA 32 -0.1697

ALA 32 THR 33 0.0805

THR 33 VAL 34 -0.1306

VAL 34 LEU 35 -0.1070

LEU 35 LEU 36 -0.0427

LEU 36 VAL 37 -0.0578

VAL 37 ILE 38 -0.2070

ILE 38 VAL 39 -0.0058

VAL 39 LEU 40 -0.0115

LEU 40 LEU 41 -0.0761

LEU 41 ALA 42 -0.1007

ALA 42 GLY 43 0.0055

GLY 43 SER 44 -0.0234

SER 44 TYR 45 -0.0695

TYR 45 LEU 46 -0.0623

LEU 46 ALA 47 0.0072

ALA 47 VAL 48 -0.0632

VAL 48 LEU 49 -0.0503

LEU 49 ALA 50 -0.0220

ALA 50 GLU 51 0.0179

GLU 51 ARG 52 -0.0608

ARG 52 GLY 53 0.0330

GLY 53 ALA 54 0.0028

ALA 54 PRO 55 0.0415

PRO 55 GLY 56 -0.0010

GLY 56 ALA 57 -0.0294

ALA 57 GLN 58 0.0514

GLN 58 LEU 59 -0.0250

LEU 59 ILE 60 -0.0608

ILE 60 THR 61 0.0306

THR 61 TYR 62 0.0564

TYR 62 PRO 63 -0.0560

PRO 63 ARG 64 -0.0128

ARG 64 ALA 65 0.0069

ALA 65 LEU 66 0.0486

LEU 66 TRP 67 -0.0694

TRP 67 TRP 68 0.0057

TRP 68 SER 69 0.0026

SER 69 VAL 70 -0.0279

VAL 70 GLU 71 -0.0278

GLU 71 THR 72 0.0821

THR 72 ALA 73 -0.1111

ALA 73 THR 74 0.0014

THR 74 THR 75 0.0163

THR 75 VAL 76 -0.0682

VAL 76 GLY 77 -0.0224

GLY 77 TYR 78 -0.0693

TYR 78 GLY 79 0.0277

GLY 79 ASP 80 -0.0496

ASP 80 LEU 81 -0.0086

LEU 81 TYR 82 0.0561

TYR 82 PRO 83 0.0804

PRO 83 VAL 84 -0.0942

VAL 84 THR 85 0.0550

THR 85 LEU 86 0.0227

LEU 86 TRP 87 0.0353

TRP 87 GLY 88 0.0207

GLY 88 ARG 89 -0.0342

ARG 89 CYS 90 -0.0008

CYS 90 VAL 91 -0.0067

VAL 91 ALA 92 -0.0158

ALA 92 VAL 93 0.0079

VAL 93 VAL 94 0.1022

VAL 94 VAL 95 0.0603

VAL 95 MET 96 0.0235

MET 96 VAL 97 0.0579

VAL 97 ALA 98 0.0910

ALA 98 GLY 99 -0.0184

GLY 99 ILE 100 0.2085

ILE 100 THR 101 -0.0476

THR 101 SER 102 0.0432

SER 102 PHE 103 0.0416

PHE 103 GLY 104 0.0693

GLY 104 LEU 105 -0.1026

LEU 105 VAL 106 0.0338

VAL 106 THR 107 0.2269

THR 107 ALA 108 -0.0844

ALA 108 ALA 109 -0.0357

ALA 109 LEU 110 0.1376

LEU 110 ALA 111 0.0523

ALA 111 THR 112 -0.1743

THR 112 TRP 113 0.1953

TRP 113 PHE 114 -0.0739

PHE 114 VAL 115 -0.0232

VAL 115 GLY 116 0.0249

GLY 116 ARG 117 -0.0980

ARG 117 GLU 118 -0.0251

GLU 118 GLN 119 0.0525

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.

Should you encounter any unexpected behaviour, please let us know.

*** ***

CA strain for 20112615465264077

--- normal mode 11 ---

Should you encounter any unexpected behaviour,
please let us know.

* *